RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 ERVK-24P63145 666 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 GUCY1B3Q02153 619 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 TRIM29Q14134 588 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 SEPT2Q15019 361 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 DYNLL2Q96FJ2 89 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 CCDC34Q96HJ3 373 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 KIAA1683Q9H0B3 1180 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 PORCNQ9H237 461 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 DCP1AQ9NPI6 582 aaPredicted RBP13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 KCNG1Q9UIX4 513 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
CHRNB1-202ENST00000536404 LAMA4Q16363 1823 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 NAV1Q8NEY1 1877 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 SMIM22K7EJ46 135 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 CUTAO60888 179 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 MBD4O95243 580 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 HMGCRP04035 888 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 NCAPHQ15003 741 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 TRIB2Q92519 343 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 APPBP2Q92624 585 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 TMX1Q9H3N1 280 aa13.09□□□□□ -0.31
CHRNB1-202ENST00000536404 DDX60LQ5H9U9 1706 aaKnown RBP13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 ZNF213O14771 459 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 VCAM1P19320 739 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 USP14P54578 494 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 GNL2Q13823 731 aaKnown RBP13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 TUBB2AQ13885 445 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 CT47A1Q5JQC4 288 aaPredicted RBP13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 MB21D2Q8IYB1 491 aaPredicted RBP13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 WASF1Q92558 559 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 USP6NLQ92738 828 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 NUDT12Q9BQG2 462 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 TUBB2BQ9BVA1 445 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 ZMYM6O95789 1325 aa13.08□□□□□ -0.32
CHRNB1-202ENST00000536404 CYP2D7A0A087X1C5 515 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 MYO1CO00159 1063 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 MAPK4P31152 587 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 CLCN6P51797 869 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 ERCC6LQ2NKX8 1250 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 MORN1Q5T089 497 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 GPR142Q7Z601 462 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 PLEKHH3Q7Z736 793 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 VSTM4Q8IW00 320 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 GPR161Q8N6U8 529 aaKnown RBP13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 MED4Q9NPJ6 270 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 HPSEQ9Y251 543 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 RPTORQ8N122 1335 aa13.07□□□□□ -0.32
CHRNB1-202ENST00000536404 STX10O60499 249 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 IVLP07476 585 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 PNMA6AP0CW24 399 aaPredicted RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 CCL14Q16627 93 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 SWT1Q5T5J6 900 aaKnown RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 KANK3Q6NY19 840 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 TRIML1Q8N9V2 468 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 PAWRQ96IZ0 340 aaKnown RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 TACO1Q9BSH4 297 aaKnown RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 BTBD7Q9P203 1132 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 JRKLQ9Y4A0 524 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 POTEB2H3BUK9 544 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 M0R2C6 588 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 URI1O94763 535 aaPredicted RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 XRCC5P13010 732 aaKnown RBP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 AKR1B1P15121 316 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 FXR1P51114 621 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 UBE3CQ15386 1083 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 KIAA1755Q5JYT7 1200 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 MAP3K21Q5TCX8 1036 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 CLEC10AQ8IUN9 316 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 SIAH1Q8IUQ4 282 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 EGFL6Q8IUX8 553 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 IQUBQ8NA54 791 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 GOLGA5Q8TBA6 731 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 SOCS4Q8WXH5 440 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 ATP8A2Q9NTI2 1148 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 FHOD1Q9Y613 1164 aa13.06□□□□□ -0.32
CHRNB1-202ENST00000536404 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 NEDD4P46934 1319 aa13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 SPDYE16A6NNV3 312 aaPredicted RBP13.05□□□□□ -0.32
CHRNB1-202ENST00000536404 USP17L12C9JPN9 530 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms