RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 USP11P51784 963 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 KRT85P78386 507 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 ARHGAP4P98171 946 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 TTC38Q5R3I4 469 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 ARHGEF16Q5VV41 709 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 ANO1Q5XXA6 986 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDCA3-206ENST00000536241 PLEKHH3Q7Z736 793 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 CRYGNQ8WXF5 182 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 IVNS1ABPQ9Y6Y0 642 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 PFASO15067 1338 aa13.12□□□□□ -0.31
CDCA3-206ENST00000536241 ZNFX1Q9P2E3 1918 aaKnown RBP13.12□□□□□ -0.31
CDCA3-206ENST00000536241 DNAJC25-GNG10A0A024R161 153 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 SOWAHBA6NEL2 793 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 EIF2AK2P19525 551 aaKnown RBP13.11□□□□□ -0.31
CDCA3-206ENST00000536241 PTPREP23469 700 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 NSUN6Q8TEA1 469 aaKnown RBP13.11□□□□□ -0.31
CDCA3-206ENST00000536241 EHMT1Q9H9B1 1298 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 PXMP2Q9NR77 195 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.11□□□□□ -0.31
CDCA3-206ENST00000536241 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 MYH7BA7E2Y1 1941 aa13.11□□□□□ -0.31
CDCA3-206ENST00000536241 FIBPO43427 364 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 COBLO75128 1261 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 TDP2O95551 362 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 CYP3A4P08684 503 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-206ENST00000536241 ADORA2AP29274 412 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 CTGFP29279 349 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 ZNF76P36508 570 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 PGM5Q15124 567 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 PTPAQ15257 358 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 FAM133AQ8N9E0 248 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 LINC00301Q8NCQ3 95 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 DNERQ8NFT8 737 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 IL31RAQ8NI17 732 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 CFHR5Q9BXR6 569 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 RCOR1Q9UKL0 485 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 DDX49Q9Y6V7 483 aaKnown RBP13.1□□□□□ -0.31
CDCA3-206ENST00000536241 RPTORQ8N122 1335 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 NR3C2P08235 984 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 NASPP49321 788 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-206ENST00000536241 SP3Q02447 781 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 PTGDRQ13258 359 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 SLC39A14Q15043 492 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 STK38Q15208 465 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 PPP4R3AQ6IN85 833 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 ABRAQ8N0Z2 381 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 CYP2W1Q8TAV3 490 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 LEO1Q8WVC0 666 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-206ENST00000536241 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
CDCA3-206ENST00000536241 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
CDCA3-206ENST00000536241 DOCK3Q8IZD9 2030 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 ASTN1O14525 1302 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 CYP3A7-CYP3A51PA0A087WV96 503 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 SLC15A5A6NIM6 579 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 FAM86B1E9PN63 330 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 FAM86B2P0C5J1 330 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 CYP3A7P24462 503 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-206ENST00000536241 CIITAP33076 1130 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 PSMC4P43686 418 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-206ENST00000536241 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
CDCA3-206ENST00000536241 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-206ENST00000536241 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
CDCA3-206ENST00000536241 GRB14Q14449 540 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 MORN1Q5T089 497 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 PCNX4Q63HM2 1172 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 DPP9Q86TI2 863 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 C4orf32Q8N8J7 132 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 ARHGAP39Q9C0H5 1083 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 TMEM60Q9H2L4 133 aa13.09□□□□□ -0.31
CDCA3-206ENST00000536241 ADD3Q9UEY8 706 aaKnown RBP13.09□□□□□ -0.31
CDCA3-206ENST00000536241 DDX25Q9UHL0 483 aaKnown RBP13.09□□□□□ -0.31
CDCA3-206ENST00000536241 GPR25O00155 361 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 TNPO2O14787 897 aaKnown RBP13.08□□□□□ -0.32
CDCA3-206ENST00000536241 SPTLC2O15270 562 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 SLC37A4O43826 429 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
CDCA3-206ENST00000536241 YEATS4O95619 227 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 TPRNQ4KMQ1 711 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 PRR16Q569H4 304 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 FGD4Q96M96 766 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 UIMC1Q96RL1 719 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 IWS1Q96ST2 819 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 MXRA8Q9BRK3 442 aa13.08□□□□□ -0.32
CDCA3-206ENST00000536241 GJD2Q9UKL4 321 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms