RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 PLA2G4AP47712 749 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PPARAQ07869 468 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 CUL4BQ13620 913 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PKN1Q16512 942 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 ARHGAP29Q52LW3 1261 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PARP10Q53GL7 1025 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 NOM1Q5C9Z4 860 aaKnown RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 CDKAL1Q5VV42 579 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 TAF3Q5VWG9 929 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 SPATA1Q5VX52 437 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 SUSD4Q5VX71 490 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 RSRC2Q7L4I2 434 aaKnown RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 ZNF654Q8IZM8 581 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 LCORLQ8N3X6 602 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 UBXN4Q92575 508 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 TNFRSF25Q93038 417 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 FERMT2Q96AC1 680 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 SHISA4Q96DD7 197 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 CCDC34Q96HJ3 373 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 PHF20Q9BVI0 1012 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 CARD6Q9BX69 1037 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 CSRNP2Q9H175 543 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 RAI14Q9P0K7 980 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 KCNJ14Q9UNX9 436 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 SLC4A4Q9Y6R1 1079 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.5□□□□□ -1.37
VPS33A-203ENST00000536212 ITIH6Q6UXX5 1313 aa6.5□□□□□ -1.37
VPS33A-203ENST00000536212 BCORQ6W2J9 1755 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 ERICH2A1L162 156 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 LRRC10BA6NIK2 292 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 TRIM75PA6NK02 468 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 AKR1B15C9JRZ8 316 aaPredicted RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 CLGNO14967 610 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 URI1O94763 535 aaPredicted RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 STAU1O95793 577 aaKnown RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 CASQ1P31415 396 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 TDO2P48775 406 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 SETQ01105 290 aaPredicted RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 GOLGA8FQ08AF8 430 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 GOLGA8DPQ0D2H9 430 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 TUBB2AQ13885 445 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 SPECC1Q5M775 1068 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 INTS5Q6P9B9 1019 aaKnown RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 GALNT6Q8NCL4 622 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 MNS1Q8NEH6 495 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 SREK1Q8WXA9 508 aaKnown RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 ESR2Q92731 530 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 GSDMAQ96QA5 445 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 TUBB2BQ9BVA1 445 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 BRIP1Q9BX63 1249 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 NAA15Q9BXJ9 866 aaKnown RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 ETNK1Q9HBU6 452 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 SEC31BQ9NQW1 1179 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 SAMSN1Q9NSI8 373 aaKnown RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 RBM28Q9NW13 759 aaKnown RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 ARGLU1Q9NWB6 273 aaPredicted RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 PPP1R1BQ9UD71 204 aaPredicted RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 ADD3Q9UEY8 706 aaKnown RBP6.49□□□□□ -1.37
VPS33A-203ENST00000536212 MRFAP1Q9Y605 127 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 CNTNAP5Q8WYK1 1306 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 RREB1Q92766 1687 aa6.49□□□□□ -1.37
VPS33A-203ENST00000536212 A0A087X0B3 334 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 DDAH1O94760 285 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CAMTA2O94983 1202 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 NTSR2O95665 410 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 ABL1P00519 1130 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CALM1P0DP23 149 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CALM2P0DP24 149 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CALM3P0DP25 149 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 XBP1P17861 261 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CYP7A1P22680 504 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 IGFBP4P22692 258 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 KRT2P35908 639 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 IGHMBP2P38935 993 aaKnown RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 GNG11P61952 73 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 ATP2C1P98194 919 aaPredicted RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 PPP2R3AQ06190 1150 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 NPY5RQ15761 445 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CCDC152Q4G0S7 254 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 TMCO3Q6UWJ1 677 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 TOGARAM2Q6ZUX3 1019 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 USP49Q70CQ1 688 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 ZNF771Q7L3S4 317 aaPredicted RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 TNS4Q8IZW8 715 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 MSL3Q8N5Y2 521 aaKnown RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 BEND7Q8N7W2 519 aaPredicted RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 RABGGTAQ92696 567 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CCDC51Q96ER9 411 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 PAGE5Q96GU1 130 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 WDR24Q96S15 920 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CDC5LQ99459 802 aaKnown RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 PYM1Q9BRP8 204 aaKnown RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 RIOK1Q9BRS2 568 aaKnown RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 UBAC1Q9BSL1 405 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 MKNK1Q9BUB5 465 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 CABP5Q9NP86 173 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 EGFL7Q9UHF1 273 aa6.48□□□□□ -1.37
VPS33A-203ENST00000536212 IQSEC3Q9UPP2 1182 aaPredicted RBP6.48□□□□□ -1.37
VPS33A-203ENST00000536212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms