RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PDE8BO95263 885 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 RDXP35241 583 aaKnown RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 PPP1R2P41236 205 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 MAGEA1P43355 309 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 TDO2P48775 406 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 SLC8A3P57103 927 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 IFFO1Q0D2I5 559 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 TROAPQ12815 778 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 NKX1-1Q15270 411 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 SPA17Q15506 151 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 ESCO1Q5FWF5 840 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 RNF187Q5TA31 235 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 ANKRD40Q6AI12 368 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 FAM114A1Q8IWE2 563 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 SCFD2Q8WU76 684 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 N4BP2L2Q92802 583 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 TATDN2Q93075 761 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 SEC16BQ96JE7 1060 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 TRIM47Q96LD4 638 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 CNOT6LQ96LI5 555 aaKnown RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 CCDC42Q96M95 316 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 RUFY1Q96T51 708 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 C7orf25Q9BPX7 421 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 IFIH1Q9BYX4 1025 aaKnown RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 ISCUQ9H1K1 167 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 KDM4CQ9H3R0 1056 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 RNF41Q9H4P4 317 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 EBF2Q9HAK2 575 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 MAGEF1Q9HAY2 307 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 EPB41L5Q9HCM4 733 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 KCNMB3Q9NPA1 279 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 DISC1Q9NRI5 854 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 HAUS2Q9NVX0 235 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 MAGEC2Q9UBF1 373 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 MAPK8IP1Q9UQF2 711 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 PLAAQ9Y263 795 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 V9GY48 417 aaPredicted RBP7.67□□□□□ -1.18
CPSF7-215ENST00000536145 TNKSO95271 1327 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 FLT1P17948 1338 aa7.67□□□□□ -1.18
CPSF7-215ENST00000536145 ZSCAN5CA6NGD5 496 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 ORC4O43929 436 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 IPO7O95373 1038 aaKnown RBP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 GSTA1P08263 222 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CALM1P0DP23 149 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CALM2P0DP24 149 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CALM3P0DP25 149 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 NF2P35240 595 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 STAT6P42226 847 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 SCTRP47872 440 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 ERVK-9P63128 1117 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 ELF3P78545 371 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 ZNF844Q08AG5 666 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 BIRC3Q13489 604 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 RIPK1Q13546 671 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CFAP221Q4G0U5 840 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 MEI1Q5TIA1 1274 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CDCA2Q69YH5 1023 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CENPPQ6IPU0 288 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 FOXR2Q6PJQ5 311 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CCDC121Q6ZUS5 278 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 KRT28Q7Z3Y7 464 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 SRBD1Q8N5C6 995 aaKnown RBP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 MAGEB6Q8N7X4 407 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 ENAHQ8N8S7 591 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 SPATA5Q8NB90 893 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 NUP133Q8WUM0 1156 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 RAPGEF5Q92565 580 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CENPTQ96BT3 561 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 TLCD1Q96CP7 247 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 FAM212AQ96EL1 285 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 MS4A14Q96JA4 679 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CCDC114Q96M63 670 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 ALS2CR12Q96Q35 445 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 ORAI2Q96SN7 254 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 TXLNGYQ9BZA5 131 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 SEMA6BQ9H3T3 888 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 CUEDC2Q9H467 287 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 POLD4Q9HCU8 107 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
CPSF7-215ENST00000536145 COL1A1P02452 1464 aaPredicted RBP7.66□□□□□ -1.18
CPSF7-215ENST00000536145 GOLGA6L7A0A1B0GV03 622 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 BICDL2A1A5D9 508 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 ERICH2A1L162 156 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 ANKRD18BA2A2Z9 1011 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 ANKRD33BA6NCL7 494 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 BTNL10A8MVZ5 291 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 ERVV-2B6SEH9 535 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 E7EVH7 732 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 SMIM22K7EJ46 135 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 RAD51CO43502 376 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 ATP6V1G2O95670 118 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 ALADP13716 330 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 TRIM21P19474 475 aaKnown RBP7.65□□□□□ -1.18
CPSF7-215ENST00000536145 ITGA6P23229 1130 aa7.65□□□□□ -1.18
CPSF7-215ENST00000536145 PAX7P23759 505 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms