RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 MYL10Q9BUA6 226 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 AP5M1Q9H0R1 490 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 RIOX1Q9H6W3 641 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 GPHNQ9NQX3 736 aaPredicted RBP10.96□□□□□ -0.65
CDCA3-204ENST00000535406 PCDH10Q9P2E7 1040 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 PCDHA1Q9Y5I3 950 aa10.96□□□□□ -0.65
CDCA3-204ENST00000535406 LAMA3Q16787 3333 aa10.96□□□□□ -0.66
CDCA3-204ENST00000535406 CYTH3O43739 400 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 PQBP1O60828 265 aaKnown RBP10.95□□□□□ -0.66
CDCA3-204ENST00000535406 PPP1R11O60927 126 aaPredicted RBP10.95□□□□□ -0.66
CDCA3-204ENST00000535406 CFBP00751 764 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 LIFRP42702 1097 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 PSEN1P49768 467 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 NKX3-2P78367 333 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
CDCA3-204ENST00000535406 BEX3Q00994 111 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 TRAF1Q13077 416 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 PPP2R5BQ15173 497 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 FSCN1Q16658 493 aaKnown RBP10.95□□□□□ -0.66
CDCA3-204ENST00000535406 SLC35G1Q2M3R5 365 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 TMTC2Q8N394 836 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 SYTL5Q8TDW5 730 aaPredicted RBP10.95□□□□□ -0.66
CDCA3-204ENST00000535406 MFRPQ9BY79 579 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 WDR11Q9BZH6 1224 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 UBE2OQ9C0C9 1292 aaKnown RBP10.95□□□□□ -0.66
CDCA3-204ENST00000535406 PDLIM7Q9NR12 457 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 PCDHB8Q9UN66 801 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 Q9Y3F1 56 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 PCDHB13Q9Y5F0 798 aa10.95□□□□□ -0.66
CDCA3-204ENST00000535406 ELP1O95163 1332 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 MROH7Q68CQ1 1323 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 BAZ2BQ9UIF8 2168 aaKnown RBP10.94□□□□□ -0.66
CDCA3-204ENST00000535406 PNMA6FA0A0J9YX94 578 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 CTAGE5O15320 804 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 DYNC1LI2O43237 492 aaPredicted RBP10.94□□□□□ -0.66
CDCA3-204ENST00000535406 ZEB2O60315 1214 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 CENPBP07199 599 aaPredicted RBP10.94□□□□□ -0.66
CDCA3-204ENST00000535406 CLTBP09497 229 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 CALM1P0DP23 149 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 CALM2P0DP24 149 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 CALM3P0DP25 149 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 PTGS1P23219 599 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 HSD17B4P51659 736 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 GHRHRQ02643 423 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 TLE2Q04725 743 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 COL9A3Q14050 684 aaPredicted RBP10.94□□□□□ -0.66
CDCA3-204ENST00000535406 KRT32Q14532 448 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 DUSP28Q4G0W2 176 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 NSUN6Q8TEA1 469 aaKnown RBP10.94□□□□□ -0.66
CDCA3-204ENST00000535406 SCFD2Q8WU76 684 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 TBC1D5Q92609 795 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 NEK1Q96PY6 1258 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 RMDN3Q96TC7 470 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 SPZ1Q9BXG8 430 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 LRRC2Q9BYS8 371 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 COL20A1Q9P218 1284 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 SEC63Q9UGP8 760 aaKnown RBP10.94□□□□□ -0.66
CDCA3-204ENST00000535406 SLC12A7Q9Y666 1083 aa10.94□□□□□ -0.66
CDCA3-204ENST00000535406 A0A0U1RQG5 324 aaPredicted RBP10.93□□□□□ -0.66
CDCA3-204ENST00000535406 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
CDCA3-204ENST00000535406 DCDC2CA8MYV0 355 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 OPLAHO14841 1288 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 NKRFO15226 690 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDCA3-204ENST00000535406 EIF2AK2P19525 551 aaKnown RBP10.93□□□□□ -0.66
CDCA3-204ENST00000535406 RXRAP19793 462 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 GNAQP50148 359 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 TMEM63BQ5T3F8 832 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 ARHGEF16Q5VV41 709 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 CXCL17Q6UXB2 119 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 ANKRD33Q7Z3H0 272 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 MICU3Q86XE3 530 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 TDHQ8IZJ6 230 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 SAMD3Q8N6K7 520 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 OR6J1Q8NGC5 347 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 RRP36Q96EU6 259 aaKnown RBP10.93□□□□□ -0.66
CDCA3-204ENST00000535406 TOX2Q96NM4 488 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 TAAR1Q96RJ0 339 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 IWS1Q96ST2 819 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 LZTS2Q9BRK4 669 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 PXMP2Q9NR77 195 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 PPP4R2Q9NY27 417 aa10.93□□□□□ -0.66
CDCA3-204ENST00000535406 MAP3K20Q9NYL2 800 aaKnown RBP10.93□□□□□ -0.66
CDCA3-204ENST00000535406 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 CABYRO75952 493 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 REC8O95072 547 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 PLEKHA8P1O95397 391 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 TXNP10599 105 aaKnown RBP10.92□□□□□ -0.66
CDCA3-204ENST00000535406 HOXA13P31271 388 aaPredicted RBP10.92□□□□□ -0.66
CDCA3-204ENST00000535406 CPT1AP50416 773 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 TTLL4Q14679 1199 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 STXBP2Q15833 593 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 ADCK5Q3MIX3 580 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 ERICH6BQ5W0A0 696 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 SYNE3Q6ZMZ3 975 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
CDCA3-204ENST00000535406 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
CDCA3-204ENST00000535406 SGMS1Q86VZ5 419 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms