RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 MRPL11Q9Y3B7 192 aaKnown RBP21.55■■□□□ 1.04
CTSB-233ENST00000534636 VCANP13611 3396 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 KPNA6O60684 536 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 TXNP10599 105 aaKnown RBP21.54■■□□□ 1.04
CTSB-233ENST00000534636 CCL23P55773 120 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 QRICH1Q2TAL8 776 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 FAM47CQ5HY64 1035 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 TTC22Q5TAA0 569 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 RASIP1Q5U651 963 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 FBXO11Q86XK2 927 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 RPUSD2Q8IZ73 545 aaKnown RBP21.54■■□□□ 1.04
CTSB-233ENST00000534636 NSUN6Q8TEA1 469 aaKnown RBP21.54■■□□□ 1.04
CTSB-233ENST00000534636 ZNF576Q9H609 170 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 KIAA1217Q5T5P2 1943 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 UMODL1Q5DID0 1318 aa21.54■■□□□ 1.04
CTSB-233ENST00000534636 FGBP02675 491 aa21.53■■□□□ 1.04
CTSB-233ENST00000534636 HERVK_113Q902F9 699 aa21.53■■□□□ 1.04
CTSB-233ENST00000534636 MSRAQ9UJ68 235 aa21.53■■□□□ 1.04
CTSB-233ENST00000534636 SUPT16HQ9Y5B9 1047 aaKnown RBP21.53■■□□□ 1.04
CTSB-233ENST00000534636 RAB30Q15771 203 aa21.52■■□□□ 1.04
CTSB-233ENST00000534636 PBX4Q9BYU1 374 aa21.52■■□□□ 1.04
CTSB-233ENST00000534636 VAT1LQ9HCJ6 419 aa21.52■■□□□ 1.04
CTSB-233ENST00000534636 TRMT13Q9NUP7 481 aaKnown RBP21.52■■□□□ 1.04
CTSB-233ENST00000534636 GBF1Q92538 1859 aa21.52■■□□□ 1.03
CTSB-233ENST00000534636 A6NJR5 290 aa21.51■■□□□ 1.03
CTSB-233ENST00000534636 GSPT1P15170 499 aaKnown RBP21.51■■□□□ 1.03
CTSB-233ENST00000534636 ARHGEF16Q5VV41 709 aa21.51■■□□□ 1.03
CTSB-233ENST00000534636 NFRKBQ6P4R8 1299 aa21.51■■□□□ 1.03
CTSB-233ENST00000534636 OTOP2Q7RTS6 562 aa21.51■■□□□ 1.03
CTSB-233ENST00000534636 SYTL5Q8TDW5 730 aaPredicted RBP21.51■■□□□ 1.03
CTSB-233ENST00000534636 IWS1Q96ST2 819 aa21.51■■□□□ 1.03
CTSB-233ENST00000534636 RMDN3Q96TC7 470 aa21.51■■□□□ 1.03
CTSB-233ENST00000534636 WNT8AQ9H1J5 351 aa21.51■■□□□ 1.03
CTSB-233ENST00000534636 U3KPZ7 1027 aaPredicted RBP21.51■■□□□ 1.03
CTSB-233ENST00000534636 ERICH2A1L162 156 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 GRXCR1A8MXD5 290 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 PFKMP08237 780 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 GRIN2CQ14957 1233 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 STXBP2Q15833 593 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 SEPT14Q6ZU15 432 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 COPS5Q92905 334 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 GAS2L1Q99501 681 aaPredicted RBP21.5■■□□□ 1.03
CTSB-233ENST00000534636 AMNQ9BXJ7 453 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 IL25Q9H293 177 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 JMJD4Q9H9V9 463 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 NOD1Q9Y239 953 aa21.5■■□□□ 1.03
CTSB-233ENST00000534636 TANC1Q9C0D5 1861 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 CFBP00751 764 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 GH1P01241 217 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 CYP2C9P11712 490 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 PDE4AP27815 886 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 PBX2P40425 430 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 PTPN11Q06124 597 aaPredicted RBP21.49■■□□□ 1.03
CTSB-233ENST00000534636 SART3Q15020 963 aaKnown RBP21.49■■□□□ 1.03
CTSB-233ENST00000534636 NBPF20Q3BBV1 942 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 RALYLQ86SE5 291 aaKnown RBP21.49■■□□□ 1.03
CTSB-233ENST00000534636 SCLYQ96I15 445 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 TAAR1Q96RJ0 339 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 CHD9Q3L8U1 2897 aa21.49■■□□□ 1.03
CTSB-233ENST00000534636 ZBBXA8MT70 800 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 KLRF2D3W0D1 207 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 ARIH2O95376 493 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 EIF2AK2P19525 551 aaKnown RBP21.48■■□□□ 1.03
CTSB-233ENST00000534636 CHMP4BP1P59074 171 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 TBC1D5Q92609 795 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 CXXC1Q9P0U4 656 aaPredicted RBP21.48■■□□□ 1.03
CTSB-233ENST00000534636 COL20A1Q9P218 1284 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 SLC4A7Q9Y6M7 1214 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 SCN5AQ14524 2016 aa21.48■■□□□ 1.03
CTSB-233ENST00000534636 BAZ2BQ9UIF8 2168 aaKnown RBP21.47■■□□□ 1.03
CTSB-233ENST00000534636 ZBTB5O15062 677 aa21.47■■□□□ 1.03
CTSB-233ENST00000534636 TRAF1Q13077 416 aa21.47■■□□□ 1.03
CTSB-233ENST00000534636 SEC23AQ15436 765 aa21.47■■□□□ 1.03
CTSB-233ENST00000534636 CYB5R4Q7L1T6 521 aa21.47■■□□□ 1.03
CTSB-233ENST00000534636 STAG2Q8N3U4 1231 aa21.47■■□□□ 1.03
CTSB-233ENST00000534636 RETREG2Q8NC44 543 aa21.47■■□□□ 1.03
CTSB-233ENST00000534636 IFIT3O14879 490 aaKnown RBP21.46■■□□□ 1.03
CTSB-233ENST00000534636 MMP3P08254 477 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 ACTN1P12814 892 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 RFC2P35250 354 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 BFSP2Q13515 415 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 LY6KQ17RY6 165 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 CCDC62Q6P9F0 684 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 CHST3Q7LGC8 479 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 CCDC155Q8N6L0 562 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 AFG1LQ8WV93 481 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 COL25A1Q9BXS0 654 aaPredicted RBP21.46■■□□□ 1.03
CTSB-233ENST00000534636 SLC28A3Q9HAS3 691 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 PXMP2Q9NR77 195 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 MAD2L2Q9UI95 211 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 MRVI1Q9Y6F6 885 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 MYH7BA7E2Y1 1941 aa21.46■■□□□ 1.03
CTSB-233ENST00000534636 TRIP12Q14669 1992 aaPredicted RBP21.45■■□□□ 1.02
CTSB-233ENST00000534636 PITPNM1O00562 1244 aa21.45■■□□□ 1.02
CTSB-233ENST00000534636 EIF3JO75822 258 aaKnown RBP21.45■■□□□ 1.02
CTSB-233ENST00000534636 CASTP20810 708 aaKnown RBP21.45■■□□□ 1.02
CTSB-233ENST00000534636 CHMLP26374 656 aa21.45■■□□□ 1.02
CTSB-233ENST00000534636 HSD17B4P51659 736 aa21.45■■□□□ 1.02
CTSB-233ENST00000534636 DEFB128Q7Z7B8 93 aa21.45■■□□□ 1.02
CTSB-233ENST00000534636 HOMER1Q86YM7 354 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms