RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 CST5P28325 142 aaPredicted RBP5.89□□□□□ -1.47
USH1C-210ENST00000534556 EPHB4P54760 987 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 MRPS9P82933 396 aaKnown RBP5.89□□□□□ -1.47
USH1C-210ENST00000534556 SP2Q02086 613 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 TNFAIP2Q03169 654 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 TLE2Q04725 743 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 APOBRQ0VD83 1088 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 FAAP100Q0VG06 881 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 TRDNQ13061 729 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 SEMA3FQ13275 785 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 KIAA1211Q6ZU35 1233 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 DHX32Q7L7V1 743 aaKnown RBP5.89□□□□□ -1.47
USH1C-210ENST00000534556 CCDC82Q8N4S0 544 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 ARRDC4Q8NCT1 418 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 NUP133Q8WUM0 1156 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 TMEM87BQ96K49 555 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 MAP3K14Q99558 947 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 LARP6Q9BRS8 491 aaKnown RBP5.89□□□□□ -1.47
USH1C-210ENST00000534556 SPZ1Q9BXG8 430 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 AGXT2Q9BYV1 514 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 PDLIM7Q9NR12 457 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 PXMP2Q9NR77 195 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 CNPY2Q9Y2B0 182 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 ATP11BQ9Y2G3 1177 aa5.89□□□□□ -1.47
USH1C-210ENST00000534556 SPTBN5Q9NRC6 3674 aaKnown RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 PNMA6FA0A0J9YX94 578 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 ASB14A6NK59 587 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 KBTBD13C9JR72 458 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 EDIL3O43854 480 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 DHX16O60231 1041 aaKnown RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 PPFIA3O75145 1194 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 DDAH1O94760 285 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 EIF2AK2P19525 551 aaKnown RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 ADD1P35611 737 aaKnown RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 PSMC6P62333 389 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 MDM2Q00987 491 aaPredicted RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 ARHGAP1Q07960 439 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 TOB2Q14106 344 aaPredicted RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 HIC1Q14526 733 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 NTRK3Q16288 839 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 LY6KQ17RY6 165 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 DUSP28Q4G0W2 176 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 GNASQ5JWF2 1037 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 IQSEC1Q6DN90 963 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 USP17L6PQ6QN14 398 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 CXCL17Q6UXB2 119 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 Q6ZUG5 572 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 TMTC3Q6ZXV5 915 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 CATIPQ7Z7H3 387 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 TLK2Q86UE8 772 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 MICU3Q86XE3 530 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 FANCBQ8NB91 859 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 SLC43A3Q8NBI5 491 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 DNERQ8NFT8 737 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 LRCH3Q96II8 777 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 JAKMIP1Q96N16 626 aaKnown RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 CTAGE1Q96RT6 745 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 RMDN3Q96TC7 470 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 PDCD2LQ9BRP1 358 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 TSEN34Q9BSV6 310 aaKnown RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 MTA3Q9BTC8 594 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 AMNQ9BXJ7 453 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 WDR11Q9BZH6 1224 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 VTA1Q9NP79 307 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 MRPL11Q9Y3B7 192 aaKnown RBP5.88□□□□□ -1.47
USH1C-210ENST00000534556 PCDHA1Q9Y5I3 950 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 FRMPD4Q14CM0 1322 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 UMODL1Q5DID0 1318 aa5.88□□□□□ -1.47
USH1C-210ENST00000534556 C5orf42Q9H799 3197 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 KLF18A0A0U1RQI7 1052 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 ERICH2A1L162 156 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 CCDC69A6NI79 296 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 SORBS3O60504 671 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 CD4P01730 458 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 NEFLP07196 543 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 NR3C2P08235 984 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 RPS6KB1P23443 525 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 BMP8BP34820 402 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 PURAQ00577 322 aaKnown RBP5.87□□□□□ -1.47
USH1C-210ENST00000534556 PDE4DQ08499 809 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 PGM5Q15124 567 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 PKN1Q16512 942 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 FSCN1Q16658 493 aaKnown RBP5.87□□□□□ -1.47
USH1C-210ENST00000534556 UBE2SQ16763 222 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 C9orf50Q5SZB4 431 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 C1orf53Q5VUE5 145 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 ERICH6BQ5W0A0 696 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 WWC2Q6AWC2 1192 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 CASC1Q6TDU7 716 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 SEPT14Q6ZU15 432 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 C16orf59Q7L2K0 433 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 ANKRD33Q7Z3H0 272 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 RNF180Q86T96 592 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 VSIG10LQ86VR7 867 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 FAM126BQ8IXS8 530 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 KAT2BQ92831 832 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 BADQ92934 168 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 BRF1Q92994 677 aa5.87□□□□□ -1.47
USH1C-210ENST00000534556 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
USH1C-210ENST00000534556 ADD3Q9UEY8 706 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms