RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	MYL3	P08590	195 aa		28.33	■■■□□ 2.13
RELA-223	ENST00000534283	CCL23	P55773	120 aa		28.33	■■■□□ 2.13
RELA-223	ENST00000534283	MAFA	Q8NHW3	353 aa	Predicted RBP	28.33	■■■□□ 2.13
RELA-223	ENST00000534283	TIFA	Q96CG3	184 aa		28.33	■■■□□ 2.13
RELA-223	ENST00000534283	TRMT13	Q9NUP7	481 aa	Known RBP	28.33	■■■□□ 2.13
RELA-223	ENST00000534283	CXXC1	Q9P0U4	656 aa	Predicted RBP	28.33	■■■□□ 2.13
RELA-223	ENST00000534283		B4DLN1	442 aa		28.32	■■■□□ 2.12
RELA-223	ENST00000534283	TXN	P10599	105 aa	Known RBP	28.32	■■■□□ 2.12
RELA-223	ENST00000534283	PBX2	P40425	430 aa		28.32	■■■□□ 2.12
RELA-223	ENST00000534283	MRPL12	P52815	198 aa	Known RBP	28.32	■■■□□ 2.12
RELA-223	ENST00000534283	FBXO11	Q86XK2	927 aa		28.32	■■■□□ 2.12
RELA-223	ENST00000534283	MTMR8	Q96EF0	704 aa		28.32	■■■□□ 2.12
RELA-223	ENST00000534283	PBX4	Q9BYU1	374 aa		28.32	■■■□□ 2.12
RELA-223	ENST00000534283	VAT1L	Q9HCJ6	419 aa		28.32	■■■□□ 2.12
RELA-223	ENST00000534283	OPLAH	O14841	1288 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	KPNA6	O60684	536 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	FGB	P02675	491 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	CHML	P26374	656 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	PTH1R	Q03431	593 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	IFIT1B	Q5T764	474 aa	Known RBP	28.31	■■■□□ 2.12
RELA-223	ENST00000534283	MCF2L2	Q86YR7	1114 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	NSUN6	Q8TEA1	469 aa	Known RBP	28.31	■■■□□ 2.12
RELA-223	ENST00000534283	ZNF576	Q9H609	170 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	MRPL11	Q9Y3B7	192 aa	Known RBP	28.31	■■■□□ 2.12
RELA-223	ENST00000534283	RAD50	Q92878	1312 aa		28.31	■■■□□ 2.12
RELA-223	ENST00000534283	UNC80	Q8N2C7	3258 aa		28.3	■■■□□ 2.12
RELA-223	ENST00000534283	TTLL4	Q14679	1199 aa		28.3	■■■□□ 2.12
RELA-223	ENST00000534283	NBPF20	Q3BBV1	942 aa		28.3	■■■□□ 2.12
RELA-223	ENST00000534283	IWS1	Q96ST2	819 aa		28.3	■■■□□ 2.12
RELA-223	ENST00000534283	MAD2L2	Q9UI95	211 aa		28.3	■■■□□ 2.12
RELA-223	ENST00000534283	PALM3	A6NDB9	673 aa	Predicted RBP	28.29	■■■□□ 2.12
RELA-223	ENST00000534283	PPP1R11	O60927	126 aa	Predicted RBP	28.29	■■■□□ 2.12
RELA-223	ENST00000534283	CYP21A2	P08686	494 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	SUPT20HL2	P0C7V6	817 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	CYP2C9	P11712	490 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	FOSL2	P15408	326 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	GHRHR	Q02643	423 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	SLC35G1	Q2M3R5	365 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	RMDN3	Q96TC7	470 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	GPHN	Q9NQX3	736 aa	Predicted RBP	28.29	■■■□□ 2.12
RELA-223	ENST00000534283	TAF6L	Q9Y6J9	622 aa		28.29	■■■□□ 2.12
RELA-223	ENST00000534283	KLRF2	D3W0D1	207 aa		28.28	■■■□□ 2.12
RELA-223	ENST00000534283	BRDT	Q58F21	947 aa	Predicted RBP	28.28	■■■□□ 2.12
RELA-223	ENST00000534283	NFRKB	Q6P4R8	1299 aa		28.28	■■■□□ 2.12
RELA-223	ENST00000534283	LAMA4	Q16363	1823 aa		28.27	■■■□□ 2.12
RELA-223	ENST00000534283	HSD17B4	P51659	736 aa		28.27	■■■□□ 2.12
RELA-223	ENST00000534283	OTOP2	Q7RTS6	562 aa		28.27	■■■□□ 2.12
RELA-223	ENST00000534283	PPP1R13L	Q8WUF5	828 aa		28.27	■■■□□ 2.12
RELA-223	ENST00000534283	SCLY	Q96I15	445 aa		28.27	■■■□□ 2.12
RELA-223	ENST00000534283	AMN	Q9BXJ7	453 aa		28.27	■■■□□ 2.12
RELA-223	ENST00000534283	DHX16	O60231	1041 aa	Known RBP	28.26	■■■□□ 2.11
RELA-223	ENST00000534283	ARHGAP1	Q07960	439 aa		28.26	■■■□□ 2.11
RELA-223	ENST00000534283	STXBP2	Q15833	593 aa		28.26	■■■□□ 2.11
RELA-223	ENST00000534283	LY6K	Q17RY6	165 aa		28.26	■■■□□ 2.11
RELA-223	ENST00000534283	SEPT14	Q6ZU15	432 aa		28.26	■■■□□ 2.11
RELA-223	ENST00000534283	RPUSD2	Q8IZ73	545 aa	Known RBP	28.26	■■■□□ 2.11
RELA-223	ENST00000534283	AFG1L	Q8WV93	481 aa		28.26	■■■□□ 2.11
RELA-223	ENST00000534283	RUFY2	Q8WXA3	655 aa		28.26	■■■□□ 2.11
RELA-223	ENST00000534283	COL25A1	Q9BXS0	654 aa	Predicted RBP	28.26	■■■□□ 2.11
RELA-223	ENST00000534283	SENP2	Q9HC62	589 aa		28.26	■■■□□ 2.11
RELA-223	ENST00000534283		U3KPZ7	1027 aa	Predicted RBP	28.26	■■■□□ 2.11
RELA-223	ENST00000534283	EYS	Q5T1H1	3165 aa		28.25	■■■□□ 2.11
RELA-223	ENST00000534283	CUL9	Q8IWT3	2517 aa		28.25	■■■□□ 2.11
RELA-223	ENST00000534283	PTPN11	Q06124	597 aa	Predicted RBP	28.25	■■■□□ 2.11
RELA-223	ENST00000534283	PXMP2	Q9NR77	195 aa		28.25	■■■□□ 2.11
RELA-223	ENST00000534283	ZBTB5	O15062	677 aa		28.24	■■■□□ 2.11
RELA-223	ENST00000534283	SGSM2	O43147	1006 aa		28.24	■■■□□ 2.11
RELA-223	ENST00000534283	EIF3J	O75822	258 aa	Known RBP	28.24	■■■□□ 2.11
RELA-223	ENST00000534283	IRX6	P78412	446 aa	Predicted RBP	28.24	■■■□□ 2.11
RELA-223	ENST00000534283	MTIF3	Q9H2K0	278 aa	Known RBP	28.24	■■■□□ 2.11
RELA-223	ENST00000534283	DDX41	Q9UJV9	622 aa	Known RBP	28.24	■■■□□ 2.11
RELA-223	ENST00000534283	GH1	P01241	217 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	NR3C2	P08235	984 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	EIF2AK2	P19525	551 aa	Known RBP	28.23	■■■□□ 2.11
RELA-223	ENST00000534283	TRDN	Q13061	729 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	GRM4	Q14833	912 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	FAM47C	Q5HY64	1035 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	ARHGEF16	Q5VV41	709 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	STOX1	Q6ZVD7	989 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	KAT2B	Q92831	832 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	RIOX1	Q9H6W3	641 aa		28.23	■■■□□ 2.11
RELA-223	ENST00000534283	CFB	P00751	764 aa		28.22	■■■□□ 2.11
RELA-223	ENST00000534283	MMP3	P08254	477 aa		28.22	■■■□□ 2.11
RELA-223	ENST00000534283	TROAP	Q12815	778 aa		28.22	■■■□□ 2.11
RELA-223	ENST00000534283	RAB30	Q15771	203 aa		28.22	■■■□□ 2.11
RELA-223	ENST00000534283	CTAGE1	Q96RT6	745 aa		28.22	■■■□□ 2.11
RELA-223	ENST00000534283	YBX2	Q9Y2T7	364 aa	Known RBP	28.22	■■■□□ 2.11
RELA-223	ENST00000534283	PCDHA1	Q9Y5I3	950 aa		28.22	■■■□□ 2.11
RELA-223	ENST00000534283		E7EWF7	191 aa		28.21	■■■□□ 2.11
RELA-223	ENST00000534283	IFIT3	O14879	490 aa	Known RBP	28.21	■■■□□ 2.11
RELA-223	ENST00000534283	PFKM	P08237	780 aa		28.21	■■■□□ 2.11
RELA-223	ENST00000534283	MAP4K1	Q92918	833 aa		28.21	■■■□□ 2.11
RELA-223	ENST00000534283	EMID1	Q96A84	441 aa	Predicted RBP	28.21	■■■□□ 2.11
RELA-223	ENST00000534283	MAP3K20	Q9NYL2	800 aa	Known RBP	28.21	■■■□□ 2.11
RELA-223	ENST00000534283	MSRA	Q9UJ68	235 aa		28.21	■■■□□ 2.11
RELA-223	ENST00000534283	PITPNM1	O00562	1244 aa		28.2	■■■□□ 2.1
RELA-223	ENST00000534283	CYTH3	O43739	400 aa		28.2	■■■□□ 2.1
RELA-223	ENST00000534283	RGS20	O76081	388 aa		28.2	■■■□□ 2.1
RELA-223	ENST00000534283	SESTD1	Q86VW0	696 aa		28.2	■■■□□ 2.1
RELA-223	ENST00000534283	SAMD3	Q8N6K7	520 aa		28.2	■■■□□ 2.1

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms