RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 CPT1AP50416 773 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 ERVK-21P61565 698 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 PURAQ00577 322 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 DUSP28Q4G0W2 176 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 NFRKBQ6P4R8 1299 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 ERC1Q8IUD2 1116 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 MKL1Q969V6 931 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 TGS1Q96RS0 853 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 NUP88Q99567 741 aaPredicted RBP11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 PRRX2Q99811 253 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 ARMT1Q9H993 441 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 SUGCTQ9HAC7 445 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 VTA1Q9NP79 307 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 ZBED9Q6R2W3 1325 aa11.09□□□□□ -0.63
SOX9-AS1-213ENST00000533996 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 KPNA6O60684 536 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 IL9P15248 144 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 KCNA5P22460 613 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 NEK9Q8TD19 979 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 MORC4Q8TE76 937 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 RAD9AQ99638 391 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 MTG1Q9BT17 334 aaPredicted RBP11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 A1CFQ9NQ94 594 aaKnown RBP11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 TRIP12Q14669 1992 aaPredicted RBP11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 SCN10AQ9Y5Y9 1956 aa11.08□□□□□ -0.64
SOX9-AS1-213ENST00000533996 CYP2D7A0A087X1C5 515 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PRKAB2O43741 272 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 EFCAB14O75071 495 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ADD2P35612 726 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 WDR5P61964 334 aaKnown RBP11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PKN1Q16512 942 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 BRDTQ58F21 947 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 CTR9Q6PD62 1173 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PADI6Q6TGC4 694 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 AACSQ86V21 672 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 CCDC155Q8N6L0 562 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 GMCL1P1Q8NEA9 526 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 TET1Q8NFU7 2136 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 CAGE1Q8TC20 777 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 GDPD5Q8WTR4 605 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PDGFCQ9NRA1 345 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ARPP21Q9UBL0 812 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 CLIP2Q9UDT6 1046 aa11.07□□□□□ -0.64
SOX9-AS1-213ENST00000533996 MYH7P12883 1935 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ABHD14A-ACY1A0A1B0GW23 586 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 LCHNA4D1U4 455 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 GOLIM4O00461 696 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 NKRFO15226 690 aaKnown RBP eCLIP11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 MBD4O95243 580 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 GJB5O95377 273 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 NBPF20Q3BBV1 942 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 SBK1Q52WX2 424 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 HSP90AB4PQ58FF6 505 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 BMP8AQ7Z5Y6 402 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 FAM160B2Q86V87 743 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 AFAP1L1Q8TED9 768 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 CHURC1Q8WUH1 139 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 MKNK2Q9HBH9 465 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 HOMER2Q9NSB8 354 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 USP34Q70CQ2 3546 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 RAD50Q92878 1312 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 BRWD1Q9NSI6 2320 aa11.06□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ZNF318Q5VUA4 2279 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 RBM47A0AV96 593 aaKnown RBP11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 LINC01553A4QN01 128 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PLA2G6O60733 806 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 OATP04181 439 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 MYL3P08590 195 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 BMP3P12645 472 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 RASA1P20936 1047 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 STAT2P52630 851 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PTPN5P54829 565 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PRSS12P56730 875 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 UBE3CQ15386 1083 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 PTPROQ16827 1216 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 FAM47CQ5HY64 1035 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 HFE2Q6ZVN8 426 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 SPRED2Q7Z698 418 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ADHFE1Q8IWW8 467 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 FBXO16Q8IX29 292 aaPredicted RBP11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 TMEM57Q8N5G2 664 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 MRPL38Q96DV4 380 aaKnown RBP11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 TRERF1Q96PN7 1200 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 WDR11Q9BZH6 1224 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ZNF287Q9HBT7 754 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 RNF146Q9NTX7 359 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 ADD3Q9UEY8 706 aaKnown RBP11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 SLC4A4Q9Y6R1 1079 aa11.05□□□□□ -0.64
SOX9-AS1-213ENST00000533996 NCK2O43639 380 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms