RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LRRC31Q6UY01 552 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 RRAGAQ7L523 313 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 KANSL2Q9H9L4 492 aa21.49■■□□□ 1.03
CAPN1-226ENST00000533820 EIF4A3P38919 411 aaKnown RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 TTC19Q6DKK2 380 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 AFAP1L1Q8TED9 768 aa21.48■■□□□ 1.03
CAPN1-226ENST00000533820 PIGSQ96S52 555 aa21.48■■□□□ 1.03
CAPN1-226ENST00000533820 ARHGAP20Q9P2F6 1191 aa21.48■■□□□ 1.03
CAPN1-226ENST00000533820 DMGDHQ9UI17 866 aaKnown RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 EIF3CLB5ME19 914 aaKnown RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 GNAQP50148 359 aa21.48■■□□□ 1.03
CAPN1-226ENST00000533820 MAP9Q49MG5 647 aa21.48■■□□□ 1.03
CAPN1-226ENST00000533820 SMARCC1Q92922 1105 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 RRP36Q96EU6 259 aaKnown RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 EIF3CQ99613 913 aaKnown RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 LRRC1Q9BTT6 524 aa21.48■■□□□ 1.03
CAPN1-226ENST00000533820 FRMPD2Q68DX3 1309 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 GOLGB1Q14789 3259 aaKnown RBP21.48■■□□□ 1.03
CAPN1-226ENST00000533820 BICDL2A1A5D9 508 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 BUB1O43683 1085 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 MAP2K2P36507 400 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 CKAP4Q07065 602 aaKnown RBP21.47■■□□□ 1.03
CAPN1-226ENST00000533820 SND1Q7KZF4 910 aaKnown RBP eCLIP21.47■■□□□ 1.03
CAPN1-226ENST00000533820 TMC4Q7Z404 712 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 EHBP1Q8NDI1 1231 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 POLD4Q9HCU8 107 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 POTEMA6NI47 508 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 SOGA3Q5TF21 947 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 AMOTL1Q8IY63 956 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 MMTAG2Q9BU76 263 aaKnown RBP21.47■■□□□ 1.03
CAPN1-226ENST00000533820 MED4Q9NPJ6 270 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 VAV2P52735 878 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 PPP2R5AQ15172 486 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 KCTD19Q17RG1 926 aaPredicted RBP21.47■■□□□ 1.03
CAPN1-226ENST00000533820 CLEC4GQ6UXB4 293 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 CNKSR2Q8WXI2 1034 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 NLRC4Q9NPP4 1024 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 PHLPP1O60346 1717 aa21.47■■□□□ 1.03
CAPN1-226ENST00000533820 RASA1P20936 1047 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 NEK8Q86SG6 692 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 COA7Q96BR5 231 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 NUP58Q9BVL2 599 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 TBC1D7Q9P0N9 293 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 PCDHA13Q9Y5I0 950 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 MYMKA6NI61 221 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 SSBP05455 408 aaKnown RBP eCLIP21.46■■□□□ 1.03
CAPN1-226ENST00000533820 PPARDQ03181 441 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 NFIXQ14938 502 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 CLEC10AQ8IUN9 316 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 ZNF526Q8TF50 670 aaPredicted RBP21.46■■□□□ 1.03
CAPN1-226ENST00000533820 SGSM3Q96HU1 749 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 CDK5RAP3Q96JB5 506 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 EHD4Q9H223 541 aa21.46■■□□□ 1.03
CAPN1-226ENST00000533820 TUBBP07437 444 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 KIF11P52732 1056 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 RNASE9P60153 205 aaKnown RBP21.45■■□□□ 1.02
CAPN1-226ENST00000533820 GRIPAP1Q4V328 841 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 CCNI2Q6ZMN8 369 aaPredicted RBP21.45■■□□□ 1.02
CAPN1-226ENST00000533820 CALML4Q96GE6 196 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 EYA3Q99504 573 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 NDST4Q9H3R1 872 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 PALM3A6NDB9 673 aaPredicted RBP21.45■■□□□ 1.02
CAPN1-226ENST00000533820 LRRC53A6NM62 1247 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 APBA1Q02410 837 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 ARID5AQ03989 594 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 FAM114A1Q8IWE2 563 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 NUDT12Q9BQG2 462 aa21.45■■□□□ 1.02
CAPN1-226ENST00000533820 SEC63Q9UGP8 760 aaKnown RBP21.45■■□□□ 1.02
CAPN1-226ENST00000533820 GFPT1Q06210 699 aaPredicted RBP21.44■■□□□ 1.02
CAPN1-226ENST00000533820 TDRD12Q587J7 1177 aaKnown RBP21.44■■□□□ 1.02
CAPN1-226ENST00000533820 CCDC170Q8IYT3 715 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 NOC3LQ8WTT2 800 aaKnown RBP21.44■■□□□ 1.02
CAPN1-226ENST00000533820 C6orf50Q9HD87 102 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 MKRN1Q9UHC7 482 aaKnown RBP21.44■■□□□ 1.02
CAPN1-226ENST00000533820 SALL4Q9UJQ4 1053 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 TDP2O95551 362 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 FAM182BQ5T319 152 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 MCTP2Q6DN12 878 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 ANKRD2Q9GZV1 360 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 USO1O60763 962 aaKnown RBP21.44■■□□□ 1.02
CAPN1-226ENST00000533820 TACC1O75410 805 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 IVLP07476 585 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 RASSF7Q02833 373 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 CCDC181Q5TID7 509 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 SV2BQ7L1I2 683 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 CREG2Q8IUH2 290 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 MS4A14Q96JA4 679 aa21.44■■□□□ 1.02
CAPN1-226ENST00000533820 SPATA31A1Q5TZJ5 1347 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 GOLGA6BA6NDN3 693 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 USP17L5A8MUK1 530 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 SPTY2D1Q68D10 685 aaPredicted RBP21.43■■□□□ 1.02
CAPN1-226ENST00000533820 CNNM4Q6P4Q7 775 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 KRT25Q7Z3Z0 450 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 ZMYND12Q9H0C1 365 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 SNX12Q9UMY4 172 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 AGPSO00116 658 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 GNPATO15228 680 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 SLC37A4O43826 429 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 PRPF6O94906 941 aaKnown RBP21.43■■□□□ 1.02
CAPN1-226ENST00000533820 VWA3BQ502W6 1294 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms