RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 CPT1AP50416 773 aa18.49■□□□□ 0.55
CHMP4A-207ENST00000533523 FAM47CQ5HY64 1035 aa18.49■□□□□ 0.55
CHMP4A-207ENST00000533523 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
CHMP4A-207ENST00000533523 LRFN3Q9BTN0 628 aa18.49■□□□□ 0.55
CHMP4A-207ENST00000533523 RAD50Q92878 1312 aa18.49■□□□□ 0.55
CHMP4A-207ENST00000533523 EPOPA6NHQ4 379 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 ATP2A2P16615 1042 aaKnown RBP18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 NOVP48745 357 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 PURAQ00577 322 aaKnown RBP18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 PPP2R5BQ15173 497 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 KRT40Q6A162 431 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 BTNL9Q6UXG8 535 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 DEFB128Q7Z7B8 93 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 TMEM47Q9BQJ4 181 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 OSBPL3Q9H4L5 887 aa18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 GPHNQ9NQX3 736 aaPredicted RBP18.48■□□□□ 0.55
CHMP4A-207ENST00000533523 MYH7BA7E2Y1 1941 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 RFXAPO00287 272 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 SUPT20HL2P0C7V6 817 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 PDE4DQ08499 809 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 TTLL4Q14679 1199 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 PPP1R13LQ8WUF5 828 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 FAM227BQ96M60 508 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 HELLSQ9NRZ9 838 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 PCDHA11Q9Y5I1 949 aa18.47■□□□□ 0.55
CHMP4A-207ENST00000533523 LOC102724159A0A0B4J2E5 919 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 PFKMP08237 780 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 PDHBP11177 359 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 HAND2P61296 217 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 PWP2Q15269 919 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 ALX1Q15699 326 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 BRDTQ58F21 947 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 RNF207Q6ZRF8 634 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 SPRED2Q7Z698 418 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 PLEKHM2Q8IWE5 1019 aa18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 MPHOSPH6Q99547 160 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 MTG1Q9BT17 334 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-207ENST00000533523 TRIM6-TRIM34B2RNG4 842 aa18.45■□□□□ 0.54
CHMP4A-207ENST00000533523 NBPF20Q3BBV1 942 aa18.45■□□□□ 0.54
CHMP4A-207ENST00000533523 CLEC4DQ8WXI8 215 aa18.45■□□□□ 0.54
CHMP4A-207ENST00000533523 RBM47A0AV96 593 aaKnown RBP18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 NKRFO15226 690 aaKnown RBP eCLIP18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 FGAP02671 866 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 FGRP09769 529 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 ACTN1P12814 892 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 PDE4AP27815 886 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 CHMP4BP1P59074 171 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 RPS6P62753 249 aaKnown RBP18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 USH1GQ495M9 461 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 MCMDC2Q4G0Z9 681 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 SCFD2Q8WU76 684 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 COPS5Q92905 334 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 TSPYL2Q9H2G4 693 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 CD320Q9NPF0 282 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 TCP11L1Q9NUJ3 509 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 ZMYM6O95789 1325 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 WDR19Q8NEZ3 1342 aa18.44■□□□□ 0.54
CHMP4A-207ENST00000533523 CA3P07451 260 aa18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 HSPD1P10809 573 aaKnown RBP18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 SKIV2LQ15477 1246 aaKnown RBP18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 TMEM67Q5HYA8 995 aa18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 TBC1D10CQ8IV04 446 aa18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 RILPL2Q969X0 211 aa18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 PNMA2Q9UL42 364 aa18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 NOD1Q9Y239 953 aa18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 CCDC171Q6TFL3 1326 aa18.43■□□□□ 0.54
CHMP4A-207ENST00000533523 FAM86C2PA6NEL3 165 aa18.42■□□□□ 0.54
CHMP4A-207ENST00000533523 EDNRBP24530 442 aa18.42■□□□□ 0.54
CHMP4A-207ENST00000533523 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
CHMP4A-207ENST00000533523 RETREG2Q8NC44 543 aa18.42■□□□□ 0.54
CHMP4A-207ENST00000533523 DNERQ8NFT8 737 aa18.42■□□□□ 0.54
CHMP4A-207ENST00000533523 FTOQ9C0B1 505 aaKnown RBP eCLIP18.42■□□□□ 0.541e-12■■■■□ 25.8
CHMP4A-207ENST00000533523 CERS4Q9HA82 394 aa18.42■□□□□ 0.54
CHMP4A-207ENST00000533523 CFAP54Q96N23 3096 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 TLL1O43897 1013 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 TXNP10599 105 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 RFC2P35250 354 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 MFSD6Q6ZSS7 791 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 SLC9A7Q96T83 725 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 MTCH2Q9Y6C9 303 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 NEDD4P46934 1319 aa18.41■□□□□ 0.54
CHMP4A-207ENST00000533523 B4DLN1 442 aa18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 HIP1O00291 1037 aa18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 PITPNM1O00562 1244 aa18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 GTPBP6O43824 516 aaPredicted RBP18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 KPNA6O60684 536 aa18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 ARIH2O95376 493 aa18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 MRPL12P52815 198 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 C1QTNF1Q9BXJ1 281 aa18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 CPVLQ9H3G5 476 aa18.4■□□□□ 0.54
CHMP4A-207ENST00000533523 A6NJR5 290 aa18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 SNHG28P0DPA3 235 aa18.39■□□□□ 0.53
CHMP4A-207ENST00000533523 PCP11498 1178 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms