RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 HEATR3Q7Z4Q2 680 aa13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 SPZ1Q9BXG8 430 aa13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 RBM28Q9NW13 759 aaKnown RBP13.26□□□□□ -0.29
UBASH3B-208ENST00000533451 ASTN1O14525 1302 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 PGK1P00558 417 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 IGHA2P01877 340 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 METAP2P50579 478 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 RUFY3Q7L099 469 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 FCHSD1Q86WN1 690 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 SRBD1Q8N5C6 995 aaKnown RBP13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 TBC1D5Q92609 795 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 MTMR8Q96EF0 704 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 RMDN3Q96TC7 470 aa13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 SENP6Q9GZR1 1112 aaPredicted RBP13.25□□□□□ -0.29
UBASH3B-208ENST00000533451 GCOM1H8Y6P7 765 aaPredicted RBP13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 EVI5O60447 810 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 C6orf222P0C671 652 aaPredicted RBP13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 POLR2MP0CAP2 368 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 EIF2AK2P19525 551 aaKnown RBP13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 ADCYAP1R1P41586 468 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 IRX5P78411 483 aaPredicted RBP13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 TNFAIP2Q03169 654 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 RNF180Q86T96 592 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 RGS22Q8NE09 1264 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 SMARCC2Q8TAQ2 1214 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 SYTL5Q8TDW5 730 aaPredicted RBP13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 NSUN6Q8TEA1 469 aaKnown RBP13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 CUL5Q93034 780 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 FERMT2Q96AC1 680 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 TAAR1Q96RJ0 339 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 SPC25Q9HBM1 224 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 VTA1Q9NP79 307 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 PDRG1Q9NUG6 133 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 BRCA2P51587 3418 aa13.24□□□□□ -0.29
UBASH3B-208ENST00000533451 SYNRGQ9UMZ2 1314 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 CCDC196A0A1B0GTZ2 297 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 DNM1LO00429 736 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 LRRC41Q15345 812 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 C7orf61Q8IZ16 206 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 DNERQ8NFT8 737 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 LARP6Q9BRS8 491 aaKnown RBP13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 AP5M1Q9H0R1 490 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 ZSWIM6Q9HCJ5 1215 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 PDGFCQ9NRA1 345 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 COL20A1Q9P218 1284 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 ALPK3Q96L96 1907 aa13.23□□□□□ -0.29
UBASH3B-208ENST00000533451 CNTNAP5Q8WYK1 1306 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 ADCY6O43306 1168 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 SMARCA1P28370 1054 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 STK3Q13188 491 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 SEPT14Q6ZU15 432 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 UBE2Q1Q7Z7E8 422 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 TLK2Q86UE8 772 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 RNF25Q96BH1 459 aaPredicted RBP13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 OCEL1Q9H607 264 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 NR2E3Q9Y5X4 410 aa13.22□□□□□ -0.29
UBASH3B-208ENST00000533451 CPLX1O14810 134 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 OPLAHO14841 1288 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 DYNC1LI2O43237 492 aaPredicted RBP13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 DUSP11O75319 330 aaKnown RBP13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 SMPD1P17405 629 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 CDC27P30260 824 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 HSD17B4P51659 736 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 RCAN1P53805 252 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 NAPAP54920 295 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 CCT2P78371 535 aaKnown RBP13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 PPP2R5BQ15173 497 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 WDR11Q9BZH6 1224 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 TM6SF1Q9BZW5 370 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 KATNBL1Q9H079 304 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 NCOA5Q9HCD5 579 aaKnown RBP13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 PXMP2Q9NR77 195 aa13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 V9GY48 417 aaPredicted RBP13.21□□□□□ -0.29
UBASH3B-208ENST00000533451 KIAA1217Q5T5P2 1943 aa13.21□□□□□ -0.3
UBASH3B-208ENST00000533451 TNRC18O15417 2968 aaPredicted RBP13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 LOC102724159A0A0B4J2E5 919 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 PTGS1P23219 599 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 ANAPC15P60006 121 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 BEX3Q00994 111 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 PWP2Q15269 919 aaKnown RBP13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 STXBP2Q15833 593 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 IQSEC1Q6DN90 963 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 USP17L6PQ6QN14 398 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 MORC4Q8TE76 937 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 SCFD2Q8WU76 684 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 MAF1Q9H063 256 aa13.2□□□□□ -0.3
UBASH3B-208ENST00000533451 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms