RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 SNAP25P60880 206 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 RBL2Q08999 1139 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 BAATQ14032 418 aaPredicted RBP9.27□□□□□ -0.93
NXF1-215ENST00000533440 BRDTQ58F21 947 aaPredicted RBP9.27□□□□□ -0.93
NXF1-215ENST00000533440 CNKSR3Q6P9H4 555 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 NSMFQ6X4W1 530 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 SIRT2Q8IXJ6 389 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 PPP1R13LQ8WUF5 828 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 OSBP2Q969R2 916 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 ZBED2Q9BTP6 218 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 MTUS1Q9ULD2 1270 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 PRR12Q9ULL5 1215 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 TRIOO75962 3097 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 RAD50Q92878 1312 aa9.27□□□□□ -0.93
NXF1-215ENST00000533440 SIP14410 1827 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 ABHD14A-ACY1A0A1B0GW23 586 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 C19orf67A6NJJ6 358 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 ICAM1P05362 532 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 TSPY3P0CV98 308 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 TSPY8P0CW00 308 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 SELPP16109 830 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 EDNRBP24530 442 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 IKQ13123 557 aaPredicted RBP9.26□□□□□ -0.93
NXF1-215ENST00000533440 PTGISQ16647 500 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 TCTN1Q2MV58 587 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 RCSD1Q6JBY9 416 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 SESTD1Q86VW0 696 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 CCDC155Q8N6L0 562 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 DHX38Q92620 1227 aaKnown RBP9.26□□□□□ -0.93
NXF1-215ENST00000533440 APPBP2Q92624 585 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 RANBP17Q9H2T7 1088 aaKnown RBP9.26□□□□□ -0.93
NXF1-215ENST00000533440 CCPG1Q9ULG6 757 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 ISY1Q9ULR0 285 aaKnown RBP9.26□□□□□ -0.93
NXF1-215ENST00000533440 NOD1Q9Y239 953 aa9.26□□□□□ -0.93
NXF1-215ENST00000533440 NFIBO00712 420 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 GPAA1O43292 621 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 NBNO60934 754 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 EFCAB14O75071 495 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 HMMRO75330 724 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 GNAT2P19087 354 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 TDO2P48775 406 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 TFAP4Q01664 338 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 ZP2Q05996 745 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 COL19A1Q14993 1142 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 PPP2R5BQ15173 497 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 GDF6Q6KF10 455 aaPredicted RBP9.25□□□□□ -0.93
NXF1-215ENST00000533440 LRRC8DQ7L1W4 858 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 IFNL3Q8IZI9 196 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 KBTBD3Q8NAB2 608 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 SCFD2Q8WU76 684 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 COPS5Q92905 334 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 MRPL38Q96DV4 380 aaKnown RBP9.25□□□□□ -0.93
NXF1-215ENST00000533440 PRKAG3Q9UGI9 489 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 C5orf42Q9H799 3197 aa9.25□□□□□ -0.93
NXF1-215ENST00000533440 PATL2C9JE40 543 aaKnown RBP9.24□□□□□ -0.93
NXF1-215ENST00000533440 H3BQ06 376 aaPredicted RBP9.24□□□□□ -0.93
NXF1-215ENST00000533440 CKBP12277 381 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 NOVP48745 357 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 HTRA4P83105 476 aaPredicted RBP9.24□□□□□ -0.93
NXF1-215ENST00000533440 PDE4BQ07343 736 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 TRAF7Q6Q0C0 670 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 BTNL9Q6UXG8 535 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 SLC30A10Q6XR72 485 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 HFE2Q6ZVN8 426 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 RASGRP2Q7LDG7 609 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 FBXO22Q8NEZ5 403 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 SP7Q8TDD2 431 aaPredicted RBP9.24□□□□□ -0.93
NXF1-215ENST00000533440 PANK1Q8TE04 598 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 CLEC4DQ8WXI8 215 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 KAT2BQ92831 832 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 CHMP4CQ96CF2 233 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 PABPC5Q96DU9 382 aaKnown RBP9.24□□□□□ -0.93
NXF1-215ENST00000533440 C17orf80Q9BSJ5 609 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 BCL11AQ9H165 835 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 CTNNA3Q9UI47 895 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 INSL6Q9Y581 213 aa9.24□□□□□ -0.93
NXF1-215ENST00000533440 MYO15AQ9UKN7 3530 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 PTPDC1A2A3K4 754 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 M0R2C6 588 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 RNF113AO15541 343 aaKnown RBP9.23□□□□□ -0.93
NXF1-215ENST00000533440 ARIH2O95376 493 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 APPP05067 770 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 TXNP10599 105 aaKnown RBP9.23□□□□□ -0.93
NXF1-215ENST00000533440 PDE4DQ08499 809 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 IKBKEQ14164 716 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 TIGD5Q53EQ6 642 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 CCDC62Q6P9F0 684 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 ADHFE1Q8IWW8 467 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 DNERQ8NFT8 737 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 ANKS1AQ92625 1134 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 MFSD14AQ96MC6 490 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 IL17RBQ9NRM6 502 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 GTF2IRD1Q9UHL9 959 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 STX8Q9UNK0 236 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 FAM50BQ9Y247 325 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
NXF1-215ENST00000533440 CFAP54Q96N23 3096 aa9.23□□□□□ -0.93
NXF1-215ENST00000533440 DMDP11532 3685 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms