RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 PGM5Q15124 567 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 PRAMEF19Q5SWL8 479 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 TMEM63BQ5T3F8 832 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 ARMCX2Q7L311 632 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 EEPD1Q7L9B9 569 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 FBXO16Q8IX29 292 aaPredicted RBP9.05□□□□□ -0.96
COMMD9-207ENST00000533308 DIS3L2Q8IYB7 885 aaKnown RBP9.05□□□□□ -0.96
COMMD9-207ENST00000533308 BLIDQ8IZY5 108 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 REXO1Q8N1G1 1221 aaKnown RBP9.05□□□□□ -0.96
COMMD9-207ENST00000533308 DAGLBQ8NCG7 672 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 RGS22Q8NE09 1264 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 TRPV1Q8NER1 839 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 RAET1EQ8TD07 263 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 TNFRSF25Q93038 417 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 LENG1Q96BZ8 264 aaPredicted RBP9.05□□□□□ -0.96
COMMD9-207ENST00000533308 RMDN3Q96TC7 470 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 PDCD2LQ9BRP1 358 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 MCOLN1Q9GZU1 580 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 KATNBL1Q9H079 304 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 C6orf50Q9HD87 102 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 PXMP2Q9NR77 195 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 PCDHA6Q9UN73 950 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
COMMD9-207ENST00000533308 PCDHA8Q9Y5H6 950 aa9.05□□□□□ -0.96
COMMD9-207ENST00000533308 BTBD18B2RXH4 712 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 ADCY6O43306 1168 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 SNAI1O95863 264 aaPredicted RBP9.04□□□□□ -0.96
COMMD9-207ENST00000533308 GNRH1P01148 92 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 INHAP05111 366 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 EDNRBP24530 442 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 HOXD10P28358 340 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 CCND3P30281 292 aaPredicted RBP9.04□□□□□ -0.96
COMMD9-207ENST00000533308 KRT2P35908 639 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 TRAF1Q13077 416 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 COL13A1Q5TAT6 717 aaPredicted RBP9.04□□□□□ -0.96
COMMD9-207ENST00000533308 ARHGEF16Q5VV41 709 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 OLFML2BQ68BL8 750 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 FBXO18Q8NFZ0 1043 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 CCDC12Q8WUD4 166 aaPredicted RBP9.04□□□□□ -0.96
COMMD9-207ENST00000533308 WASF1Q92558 559 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 INTS4Q96HW7 963 aaKnown RBP9.04□□□□□ -0.96
COMMD9-207ENST00000533308 TINF2Q9BSI4 451 aa9.04□□□□□ -0.96
COMMD9-207ENST00000533308 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.04□□□□□ -0.96
COMMD9-207ENST00000533308 VPS37CA5D8V6 355 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 SPDYE3A6NKU9 549 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 HSP90AA1P07900 732 aaKnown RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 MYCLP12524 364 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 XRCC5P13010 732 aaKnown RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 PRKAR2AP13861 404 aaKnown RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 SYT1P21579 422 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 GNA11P29992 359 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 GRK4P32298 578 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 SREBF1P36956 1147 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 ANP32AP39687 249 aaKnown RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 MRPL12P52815 198 aaKnown RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 MRPS9P82933 396 aaKnown RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 CACNB2Q08289 660 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 TRIM29Q14134 588 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 MTFR1Q15390 333 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 GJC2Q5T442 439 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 FOXD4L5Q5VV16 416 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 ANO1Q5XXA6 986 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 FBXO46Q6PJ61 603 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 MAMDC4Q6UXC1 1216 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 PIK3AP1Q6ZUJ8 805 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 ZNF467Q7Z7K2 595 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 MORC4Q8TE76 937 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 FOXD4L4Q8WXT5 416 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 UIMC1Q96RL1 719 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 PDGFCQ9NRA1 345 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 ZHX1Q9UKY1 873 aaPredicted RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 DIS3Q9Y2L1 958 aaKnown RBP9.03□□□□□ -0.96
COMMD9-207ENST00000533308 SYNGAP1Q96PV0 1343 aa9.03□□□□□ -0.96
COMMD9-207ENST00000533308 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.02□□□□□ -0.97
COMMD9-207ENST00000533308 SORBS3O60504 671 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 RGS20O76081 388 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 ARIH2O95376 493 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 TDP2O95551 362 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 HMGCRP04035 888 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 NR3C2P08235 984 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 ZNF865P0CJ78 1059 aaPredicted RBP9.02□□□□□ -0.97
COMMD9-207ENST00000533308 CYBAP13498 195 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 XBP1P17861 261 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 PRMT2P55345 433 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 IRX5P78411 483 aaPredicted RBP9.02□□□□□ -0.97
COMMD9-207ENST00000533308 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 PDE4DQ08499 809 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 SEMA3FQ13275 785 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 AP3B2Q13367 1082 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 BECN1Q14457 450 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 NBR1Q14596 966 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 ARHGEF6Q15052 776 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 INF2Q27J81 1249 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 SLC9C1Q4G0N8 1177 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 MAP3K21Q5TCX8 1036 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 LARP1BQ659C4 914 aaKnown RBP9.02□□□□□ -0.97
COMMD9-207ENST00000533308 FERMT3Q86UX7 667 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 SLAIN1Q8ND83 568 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 DNERQ8NFT8 737 aa9.02□□□□□ -0.97
COMMD9-207ENST00000533308 CYP2W1Q8TAV3 490 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms