RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 KCTD16Q68DU8 428 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 CCDC26Q8TAB7 109 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 CDC25BP30305 580 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 TRAPPC10P48553 1259 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 TOGARAM2Q6ZUX3 1019 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
BDNF-218ENST00000533246 DPH5Q9H2P9 285 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.44□□□□□ -0.26
BDNF-218ENST00000533246 MTUS1Q9ULD2 1270 aa13.44□□□□□ -0.26
BDNF-218ENST00000533246 CDC42BPGQ6DT37 1551 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L5A8MUK1 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L15C9J2P7 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L13C9JLJ4 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L11C9JVI0 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L18D6R9N7 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L22D6RA61 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L17D6RBQ6 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L19D6RCP7 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L20D6RJB6 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 TULP2O00295 520 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
BDNF-218ENST00000533246 DLATP10515 647 aaKnown RBP13.43□□□□□ -0.26
BDNF-218ENST00000533246 PCP11498 1178 aaKnown RBP13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L24Q0WX57 530 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 MTF1Q14872 753 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 USP17L6PQ6QN14 398 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 IFT20Q8IY31 132 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 KCNF1Q9H3M0 494 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 TTLL1O95922 423 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 CD19P15391 556 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 DDIT3P35638 169 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 ZRSR2Q15696 482 aaKnown RBP13.43□□□□□ -0.26
BDNF-218ENST00000533246 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 ODR4Q5SWX8 454 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 ZNF658Q5TYW1 1059 aaPredicted RBP13.43□□□□□ -0.26
BDNF-218ENST00000533246 PPM1KQ8N3J5 372 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 AMNQ9BXJ7 453 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 TNNI1P19237 187 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 MIER3Q7Z3K6 550 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 TRIM58Q8NG06 486 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 MTRF1LQ9UGC7 380 aaKnown RBP13.43□□□□□ -0.26
BDNF-218ENST00000533246 ASIC3Q9UHC3 531 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 SETBP1Q9Y6X0 1596 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 CPDO75976 1380 aa13.43□□□□□ -0.26
BDNF-218ENST00000533246 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 PPEF1O14829 653 aaPredicted RBP13.42□□□□□ -0.26
BDNF-218ENST00000533246 LRRN2O75325 713 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 GRIN1Q05586 938 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 CHURC1Q8WUH1 139 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 PARD6BQ9BYG5 372 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.42□□□□□ -0.26
BDNF-218ENST00000533246 TMEM260Q9NX78 707 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 BBOX1O75936 387 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 CLCN6P51797 869 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 UAP1Q16222 522 aaPredicted RBP13.42□□□□□ -0.26
BDNF-218ENST00000533246 SEL1L2Q5TEA6 688 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 SRGAP1Q7Z6B7 1085 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 NLGN1Q8N2Q7 840 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 MMP10P09238 476 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 LONRF2Q1L5Z9 754 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 FAM102BQ5T8I3 360 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 CCDC105Q8IYK2 499 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 ARFGAP2Q8N6H7 521 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 IGDCC4Q8TDY8 1250 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 CD209Q9NNX6 404 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 ADAMTS1Q9UHI8 967 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 SRGAP2O75044 1071 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 RPS6KA4O75676 772 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 FTCDO95954 541 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 PRCPP42785 496 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 GUCY2DQ02846 1103 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 GRAPQ13588 217 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 KRT71Q3SY84 523 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 XKR9Q5GH70 373 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 TADA2BQ86TJ2 420 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 DGKHQ86XP1 1220 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 DHX40Q8IX18 779 aaKnown RBP13.42□□□□□ -0.26
BDNF-218ENST00000533246 NIM1KQ8IY84 436 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 RNF168Q8IYW5 571 aaPredicted RBP13.42□□□□□ -0.26
BDNF-218ENST00000533246 TAB3Q8N5C8 712 aaPredicted RBP13.42□□□□□ -0.26
BDNF-218ENST00000533246 PPP1R14CQ8TAE6 165 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
BDNF-218ENST00000533246 CCDC77Q9BR77 488 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 DISC1Q9NRI5 854 aa13.42□□□□□ -0.26
BDNF-218ENST00000533246 PNMA6AP0CW24 399 aaPredicted RBP13.41□□□□□ -0.26
BDNF-218ENST00000533246 FKBP3Q00688 224 aaKnown RBP13.41□□□□□ -0.26
BDNF-218ENST00000533246 IQCB1Q15051 598 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 EXOC3L4Q17RC7 722 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 WHAMMP3Q1A5X7 153 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 CEP85LQ5SZL2 805 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 GALNT17Q6IS24 598 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 ARMC9Q7Z3E5 817 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
BDNF-218ENST00000533246 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms