RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 COL20A1Q9P218 1284 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 SLC12A7Q9Y666 1083 aa19.29■□□□□ 0.68
PKP3-209ENST00000533069 A0A0U1RQG5 324 aaPredicted RBP19.28■□□□□ 0.68
PKP3-209ENST00000533069 OPLAHO14841 1288 aa19.28■□□□□ 0.68
PKP3-209ENST00000533069 PQBP1O60828 265 aaKnown RBP19.28■□□□□ 0.68
PKP3-209ENST00000533069 REC8O95072 547 aa19.28■□□□□ 0.68
PKP3-209ENST00000533069 HMGB1P09429 215 aaKnown RBP19.28■□□□□ 0.68
PKP3-209ENST00000533069 CLTBP09497 229 aa19.28■□□□□ 0.68
PKP3-209ENST00000533069 IRX5P78411 483 aaPredicted RBP19.28■□□□□ 0.68
PKP3-209ENST00000533069 BEX3Q00994 111 aa19.28■□□□□ 0.68
PKP3-209ENST00000533069 ARHGEF16Q5VV41 709 aa19.28■□□□□ 0.68
PKP3-209ENST00000533069 DHX32Q7L7V1 743 aaKnown RBP19.28■□□□□ 0.68
PKP3-209ENST00000533069 RRP36Q96EU6 259 aaKnown RBP19.28■□□□□ 0.68
PKP3-209ENST00000533069 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
PKP3-209ENST00000533069 SMCHD1A6NHR9 2005 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 MCM3APO60318 1980 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 DCDC2CA8MYV0 355 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 CPT1AP50416 773 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 MDM2Q00987 491 aaPredicted RBP19.27■□□□□ 0.68
PKP3-209ENST00000533069 EXOSC10Q01780 885 aaKnown RBP19.27■□□□□ 0.68
PKP3-209ENST00000533069 COL9A3Q14050 684 aaPredicted RBP19.27■□□□□ 0.68
PKP3-209ENST00000533069 TTLL4Q14679 1199 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 STXBP2Q15833 593 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 SYNE3Q6ZMZ3 975 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 RASEFQ8IZ41 740 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 VTI1AQ96AJ9 217 aa19.27■□□□□ 0.68
PKP3-209ENST00000533069 SEC63Q9UGP8 760 aaKnown RBP19.27■□□□□ 0.68
PKP3-209ENST00000533069 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
PKP3-209ENST00000533069 ARVCFO00192 962 aa19.26■□□□□ 0.67
PKP3-209ENST00000533069 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
PKP3-209ENST00000533069 BRDTQ58F21 947 aaPredicted RBP19.26■□□□□ 0.67
PKP3-209ENST00000533069 TDHQ8IZJ6 230 aa19.26■□□□□ 0.67
PKP3-209ENST00000533069 KCNB2Q92953 911 aa19.26■□□□□ 0.67
PKP3-209ENST00000533069 LRRC2Q9BYS8 371 aa19.26■□□□□ 0.67
PKP3-209ENST00000533069 PXMP2Q9NR77 195 aa19.26■□□□□ 0.67
PKP3-209ENST00000533069 KIAA0355O15063 1070 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 EPB41L2O43491 1005 aaKnown RBP19.25■□□□□ 0.67
PKP3-209ENST00000533069 EIF3JO75822 258 aaKnown RBP19.25■□□□□ 0.67
PKP3-209ENST00000533069 TXNP10599 105 aaKnown RBP19.25■□□□□ 0.67
PKP3-209ENST00000533069 EIF2AK2P19525 551 aaKnown RBP19.25■□□□□ 0.67
PKP3-209ENST00000533069 HSPA4P34932 840 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 CDK7P50613 346 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 ADCK5Q3MIX3 580 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 TMEM63BQ5T3F8 832 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 CXCL17Q6UXB2 119 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 FANCBQ8NB91 859 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 OR6J1Q8NGC5 347 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 POLR3EQ9NVU0 708 aa19.25■□□□□ 0.67
PKP3-209ENST00000533069 TRIM43BA6NCK2 446 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 PLEKHA8P1O95397 391 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 NR3C2P08235 984 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 PTGS1P23219 599 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 FAAP100Q0VG06 881 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 SH3RF1Q7Z6J0 888 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 MICU3Q86XE3 530 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 TRIM43Q96BQ3 446 aaPredicted RBP19.24■□□□□ 0.67
PKP3-209ENST00000533069 TMEM39AQ9NV64 488 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 TRIOBPQ9H2D6 2365 aa19.24■□□□□ 0.67
PKP3-209ENST00000533069 TLR3O15455 904 aaKnown RBP19.23■□□□□ 0.67
PKP3-209ENST00000533069 RXRAP19793 462 aa19.23■□□□□ 0.67
PKP3-209ENST00000533069 HOXA13P31271 388 aaPredicted RBP19.23■□□□□ 0.67
PKP3-209ENST00000533069 CCDC62Q6P9F0 684 aa19.23■□□□□ 0.67
PKP3-209ENST00000533069 APOA5Q6Q788 366 aa19.23■□□□□ 0.67
PKP3-209ENST00000533069 TMTC3Q6ZXV5 915 aa19.23■□□□□ 0.67
PKP3-209ENST00000533069 SRBD1Q8N5C6 995 aaKnown RBP19.23■□□□□ 0.67
PKP3-209ENST00000533069 SLC43A3Q8NBI5 491 aa19.23■□□□□ 0.67
PKP3-209ENST00000533069 PIBF1Q8WXW3 757 aa19.23■□□□□ 0.67
PKP3-209ENST00000533069 PDCD2LQ9BRP1 358 aa19.23■□□□□ 0.67
PKP3-209ENST00000533069 RBM28Q9NW13 759 aaKnown RBP19.23■□□□□ 0.67
PKP3-209ENST00000533069 A6NJR5 290 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 KPNA6O60684 536 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 ARIH2O95376 493 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 RAG1P15918 1043 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 RCAN1P53805 252 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 ITGA7Q13683 1181 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 LRIT3Q3SXY7 679 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 SEPT14Q6ZU15 432 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 FAM126BQ8IXS8 530 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 BADQ92934 168 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 TBX21Q9UL17 535 aa19.22■□□□□ 0.67
PKP3-209ENST00000533069 ZBTB43O43298 467 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 GH1P01241 217 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 PURAQ00577 322 aaKnown RBP19.21■□□□□ 0.67
PKP3-209ENST00000533069 PGM5Q15124 567 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 KCNV1Q6PIU1 500 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 VSIG10LQ86VR7 867 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 RAB11FIP4Q86YS3 637 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 CUL5Q93034 780 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 TCEANC2Q96MN5 208 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 JAKMIP1Q96N16 626 aaKnown RBP19.21■□□□□ 0.67
PKP3-209ENST00000533069 MTG1Q9BT17 334 aaPredicted RBP19.21■□□□□ 0.67
PKP3-209ENST00000533069 PCDH10Q9P2E7 1040 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 SNX14Q9Y5W7 946 aa19.21■□□□□ 0.67
PKP3-209ENST00000533069 PIK3CDO00329 1044 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 CCND2P30279 289 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 FGD1P98174 961 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 C8orf34Q49A92 452 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 BLOC1S2Q6QNY1 142 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 FCHSD1Q86WN1 690 aa19.2■□□□□ 0.66
PKP3-209ENST00000533069 COPS5Q92905 334 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms