RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 ASIC3Q9UHC3 531 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 IPO11Q9UI26 975 aaKnown RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 CPSF1Q10570 1443 aaKnown RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 NFKBIAP25963 317 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 SLC16A2P36021 539 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 PTK2Q05397 1052 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 ADAM9Q13443 819 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 PPFIBP2Q8ND30 876 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 GTF3C2Q8WUA4 911 aaPredicted RBP11.74□□□□□ -0.53
COLCA1-203ENST00000532918 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
COLCA1-203ENST00000532918 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 CASC4Q6P4E1 433 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 RAET1EQ8TD07 263 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 NT5C1BQ96P26 610 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 TULP4Q9NRJ4 1543 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 TLDC2A0PJX2 215 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 SASH1O94885 1247 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 UBXN2AP68543 259 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 PTH1RQ03431 593 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 NOLC1Q14978 699 aaKnown RBP eCLIP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 ME3Q16798 604 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 BARGINQ6ZT62 677 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 PEX26Q7Z412 305 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 RSAD2Q8WXG1 361 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 GPBP1L1Q9HC44 474 aaPredicted RBP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 AFG3L2Q9Y4W6 797 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 SPDYE16A6NNV3 312 aaPredicted RBP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 ITKQ08881 620 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 TTLL4Q14679 1199 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 EEPD1Q7L9B9 569 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 A6NJR5 290 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 PTPN12Q05209 780 aaKnown RBP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 RASGRF1Q13972 1273 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 MAP7Q14244 749 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 RPS6KA1Q15418 735 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 HLFQ16534 295 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 ARMCX2Q7L311 632 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 CCDC127Q96BQ5 260 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 TRIM11Q96F44 468 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 DISC1Q9NRI5 854 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 ABCB11O95342 1321 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 PDIA3P30101 505 aaKnown RBP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 PPP2R5DQ14738 602 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 DNAJC21Q5F1R6 531 aaKnown RBP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 RRAGAQ7L523 313 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 UBLCP1Q8WVY7 318 aaPredicted RBP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 LARP4BQ92615 738 aaKnown RBP11.73□□□□□ -0.53
COLCA1-203ENST00000532918 MAP4K1Q92918 833 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 AMFRQ9UKV5 643 aa11.73□□□□□ -0.53
COLCA1-203ENST00000532918 MED7O43513 233 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 NEDD9Q14511 834 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 PRPSAP1Q14558 356 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 SEPT2Q15019 361 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 C8orf74Q6P047 294 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 VPS52Q8N1B4 723 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 GRK7Q8WTQ7 553 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 PPP2R3CQ969Q6 453 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 TDRD3Q9H7E2 651 aaKnown RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 MKRN1Q9UHC7 482 aaKnown RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 FCER1AP12319 257 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 CMA1P23946 247 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 PTGDRQ13258 359 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 SETDB1Q15047 1291 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 PPP2R5EQ16537 467 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 RINT1Q6NUQ1 792 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 U2AF1L4Q8WU68 220 aaKnown RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 HERC5Q9UII4 1024 aaKnown RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 ASB14A6NK59 587 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 KCNA4P22459 653 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 NSFP46459 744 aaKnown RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 CLNS1AP54105 237 aaKnown RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 MTERF2Q49AM1 385 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 LMNTD2Q8IXW0 634 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 PPM1KQ8N3J5 372 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 URGCPQ8TCY9 931 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 MMP19Q99542 508 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 CYP2E1P05181 493 aaPredicted RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 C1orf228Q6PIY5 440 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 PNMA8AQ86V59 439 aaPredicted RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 NSUN6Q8TEA1 469 aaKnown RBP11.72□□□□□ -0.53
COLCA1-203ENST00000532918 ATP2A3Q93084 1043 aa11.72□□□□□ -0.53
COLCA1-203ENST00000532918 C1orf167Q5SNV9 1468 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 BTBD18B2RXH4 712 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 MYL1P05976 194 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 PSMC2P35998 433 aaKnown RBP11.71□□□□□ -0.53
COLCA1-203ENST00000532918 MYL7Q01449 175 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 TNFAIP2Q03169 654 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 NFIXQ14938 502 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 C7orf31Q8N865 590 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 STAMQ92783 540 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 CCDC68Q9H2F9 335 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 CPSF3Q9UKF6 684 aaKnown RBP11.71□□□□□ -0.53
COLCA1-203ENST00000532918 SMIM23A6NLE4 172 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms