RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 M0R2N6 131 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 ENC1O14682 589 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 MAP9Q49MG5 647 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 TRIM47Q96LD4 638 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 ZDHHC15Q96MV8 337 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 CCSER1Q9C0I3 900 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 USP40Q9NVE5 1235 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 KBTBD4Q9NVX7 518 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 STX8Q9UNK0 236 aa20.06■□□□□ 0.8
UBXN1-213ENST00000532904 ADAMTSL1Q8N6G6 1762 aa20.05■□□□□ 0.8
UBXN1-213ENST00000532904 F8W031 263 aaPredicted RBP20.05■□□□□ 0.8
UBXN1-213ENST00000532904 CKAP4Q07065 602 aaKnown RBP20.05■□□□□ 0.8
UBXN1-213ENST00000532904 APOBEC3HQ6NTF7 200 aaKnown RBP20.05■□□□□ 0.8
UBXN1-213ENST00000532904 STAG2Q8N3U4 1231 aa20.05■□□□□ 0.8
UBXN1-213ENST00000532904 JAKMIP2Q96AA8 810 aa20.05■□□□□ 0.8
UBXN1-213ENST00000532904 NUP58Q9BVL2 599 aa20.05■□□□□ 0.8
UBXN1-213ENST00000532904 SPZ1Q9BXG8 430 aa20.05■□□□□ 0.8
UBXN1-213ENST00000532904 KRT86O43790 486 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 CYLC1P35663 651 aaPredicted RBP20.04■□□□□ 0.8
UBXN1-213ENST00000532904 GALNT17Q6IS24 598 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 CDC42EP5Q6NZY7 148 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 SRLQ86TD4 932 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 RETREG2Q8NC44 543 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 SUPT20HQ8NEM7 779 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 DHTKD1Q96HY7 919 aaPredicted RBP20.04■□□□□ 0.8
UBXN1-213ENST00000532904 DBNDD1Q9H9R9 158 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 EXOC1Q9NV70 894 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 LCMT1Q9UIC8 334 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 MYO1CO00159 1063 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 PES1O00541 588 aaKnown RBP20.04■□□□□ 0.8
UBXN1-213ENST00000532904 DACT2Q5SW24 774 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 KIAA1328Q86T90 577 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 CCDC170Q8IYT3 715 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 BBXQ8WY36 941 aaPredicted RBP20.04■□□□□ 0.8
UBXN1-213ENST00000532904 DUSP9Q99956 384 aaKnown RBP20.04■□□□□ 0.8
UBXN1-213ENST00000532904 MXD3Q9BW11 206 aa20.04■□□□□ 0.8
UBXN1-213ENST00000532904 DDX4Q9NQI0 724 aaKnown RBP20.04■□□□□ 0.8
UBXN1-213ENST00000532904 GREB1LQ9C091 1923 aaPredicted RBP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 PP2D1A8MPX8 630 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 B4DLN1 442 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 EIF3CLB5ME19 914 aaKnown RBP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 ECE2O60344 883 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 CHRNA5P30532 468 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 CRKP46108 304 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 DAGLBQ8NCG7 672 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 RASGRP4Q8TDF6 673 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 GPKOWQ92917 476 aaPredicted RBP eCLIP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 EIF3CQ99613 913 aaKnown RBP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 TUBGCP2Q9BSJ2 902 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 TMEM60Q9H2L4 133 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 TFR2Q9UP52 801 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 PSME4Q14997 1843 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 CCDC194A0A1B0GVG4 234 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 ANO9A1A5B4 782 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 SRGAP2O75044 1071 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 NPM3O75607 178 aaKnown RBP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 UBA7P41226 1012 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 SCNN1DP51172 638 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 PICALMQ13492 652 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 RASSF8Q8NHQ8 419 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 CEP95Q96GE4 821 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 PURBQ96QR8 312 aaKnown RBP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 EHD4Q9H223 541 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 CUEDC2Q9H467 287 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 ZNHIT6Q9NWK9 470 aaKnown RBP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 SERPINB13Q9UIV8 391 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 HPCAL4Q9UM19 191 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 PCDHA6Q9UN73 950 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 RRP15Q9Y3B9 282 aaKnown RBP20.03■□□□□ 0.8
UBXN1-213ENST00000532904 PCDHA8Q9Y5H6 950 aa20.03■□□□□ 0.8
UBXN1-213ENST00000532904 IGKV6D-41A0A0C4DH26 115 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 LAD1O00515 517 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 SYF2O95926 243 aaKnown RBP20.02■□□□□ 0.8
UBXN1-213ENST00000532904 ZBED6P86452 979 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 ZBTB9Q96C00 473 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 RASSF4Q9H2L5 321 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 FAM204AQ9H8W3 233 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 NHEJ1Q9H9Q4 299 aaPredicted RBP20.02■□□□□ 0.8
UBXN1-213ENST00000532904 MAGEF1Q9HAY2 307 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 AGPAT5Q9NUQ2 364 aa20.02■□□□□ 0.8
UBXN1-213ENST00000532904 RCCD1A6NED2 376 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 RNF40O75150 1001 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 PHACTR2O75167 634 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 PRPHP41219 470 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 TYW1BQ6NUM6 668 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 CSGALNACT2Q8N6G5 542 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 LACRTQ9GZZ8 138 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 MTMR4Q9NYA4 1195 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 ZC3H4Q9UPT8 1303 aaKnown RBP20.01■□□□□ 0.79
UBXN1-213ENST00000532904 KLRF2D3W0D1 207 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 CYTH3O43739 400 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 PRPF6O94906 941 aaKnown RBP20.01■□□□□ 0.79
UBXN1-213ENST00000532904 HLA-DOAP06340 250 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 TRIM21P19474 475 aaKnown RBP20.01■□□□□ 0.79
UBXN1-213ENST00000532904 CCNE1P24864 410 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 CDK17Q00537 523 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 SLC35G1Q2M3R5 365 aa20.01■□□□□ 0.79
UBXN1-213ENST00000532904 LRRC15Q8TF66 581 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms