RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	KATNBL1	Q9H079	304 aa		11.31	□□□□□ -0.6
PPFIA1-223	ENST00000532793	DIAPH3	Q9NSV4	1193 aa		11.31	□□□□□ -0.6
PPFIA1-223	ENST00000532793	TBX21	Q9UL17	535 aa		11.31	□□□□□ -0.6
PPFIA1-223	ENST00000532793	GBF1	Q92538	1859 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	HIP1	O00291	1037 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ZNF213	O14771	459 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	FGR	P09769	529 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CSF2RA	P15509	400 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	SMPD1	P17405	629 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	DNAJB2	P25686	324 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CALML3	P27482	149 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	NT5C2	P49902	561 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CPT1A	P50416	773 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CDK7	P50613	346 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ALDH5A1	P51649	535 aa	Predicted RBP	11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	EPHB4	P54760	987 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	PDE4D	Q08499	809 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	BAAT	Q14032	418 aa	Predicted RBP	11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	TTBK2	Q6IQ55	1244 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	BTNL9	Q6UXG8	535 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	RASGRP2	Q7LDG7	609 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.3	□□□□□ -0.6	6e-6	■■□□□ 12
PPFIA1-223	ENST00000532793	HIPK3	Q9H422	1215 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	POLR3E	Q9NVU0	708 aa		11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	GNE	Q9Y223	722 aa	Known RBP	11.3	□□□□□ -0.6
PPFIA1-223	ENST00000532793	DHX16	O60231	1041 aa	Known RBP	11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	PDHB	P11177	359 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	SDS	P20132	328 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	NOV	P48745	357 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	NKX3-2	P78367	333 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	DUSP28	Q4G0W2	176 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	GPATCH4	Q5T3I0	446 aa	Known RBP	11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	TIFA	Q96CG3	184 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	GAS2L1	Q99501	681 aa	Predicted RBP	11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	WDR11	Q9BZH6	1224 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	TTYH1	Q9H313	450 aa	Predicted RBP	11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	PDGFC	Q9NRA1	345 aa		11.29	□□□□□ -0.6
PPFIA1-223	ENST00000532793	NFIB	O00712	420 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	NKRF	O15226	690 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CTAGE5	O15320	804 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	FGB	P02675	491 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	MYL3	P08590	195 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	SUPT20HL2	P0C7V6	817 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ACR	P10323	421 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CYP2C18	P33260	490 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ZNF543	Q08ER8	600 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	PPP2R5B	Q15173	497 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	RAB30	Q15771	203 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	IMMT	Q16891	758 aa	Known RBP	11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	USH1G	Q495M9	461 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	TAPT1	Q6NXT6	567 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CWC27	Q6UX04	472 aa	Known RBP	11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ZNF365	Q70YC5	407 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CHD1L	Q86WJ1	897 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	RPUSD2	Q8IZ73	545 aa	Known RBP	11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	OR6J1	Q8NGC5	347 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ZKSCAN3	Q9BRR0	538 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ZNF576	Q9H609	170 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	KAT14	Q9H8E8	782 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	IL23A	Q9NPF7	189 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	MSRA	Q9UJ68	235 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	RANBP2	P49792	3224 aa	Known RBP	11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	ASTN1	O14525	1302 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	WDR19	Q8NEZ3	1342 aa		11.28	□□□□□ -0.6
PPFIA1-223	ENST00000532793	KIAA1217	Q5T5P2	1943 aa		11.27	□□□□□ -0.6
PPFIA1-223	ENST00000532793	SZT2	Q5T011	3432 aa		11.27	□□□□□ -0.6
PPFIA1-223	ENST00000532793	CD4	P01730	458 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	PSMC6	P62333	389 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	RPS6	P62753	249 aa	Known RBP	11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	LAPTM4A	Q15012	233 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	FAM47C	Q5HY64	1035 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	TMEM240	Q5SV17	173 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	SLC30A10	Q6XR72	485 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	DGKH	Q86XP1	1220 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	TBC1D10C	Q8IV04	446 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	SMC5	Q8IY18	1101 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	DNER	Q8NFT8	737 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	MORC4	Q8TE76	937 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	SCFD2	Q8WU76	684 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	PURB	Q96QR8	312 aa	Known RBP	11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	CTNNA3	Q9UI47	895 aa		11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	DDX49	Q9Y6V7	483 aa	Known RBP	11.27	□□□□□ -0.61
PPFIA1-223	ENST00000532793	ZBBX	A8MT70	800 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	B4GALT4	O60513	344 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	KPNA6	O60684	536 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	KDM4A	O75164	1064 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	GOLGA8H	P0CJ92	632 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	CCL23	P55773	120 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	TTLL4	Q14679	1199 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	SLC43A3	Q8NBI5	491 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	PNMA1	Q8ND90	353 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	UBAC1	Q9BSL1	405 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	MTG1	Q9BT17	334 aa	Predicted RBP	11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	ZBED2	Q9BTP6	218 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	PBX4	Q9BYU1	374 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	KRT23	Q9C075	422 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	CNNM2	Q9H8M5	875 aa		11.26	□□□□□ -0.61
PPFIA1-223	ENST00000532793	NOD1	Q9Y239	953 aa		11.26	□□□□□ -0.61

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