RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 LRIT3Q3SXY7 679 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 ARHGEF16Q5VV41 709 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 GPHNQ9NQX3 736 aaPredicted RBP19.99■□□□□ 0.79
PHRF1-204ENST00000532550 COL20A1Q9P218 1284 aa19.99■□□□□ 0.79
PHRF1-204ENST00000532550 SH2B2O14492 632 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-204ENST00000532550 KIAA0355O15063 1070 aa19.98■□□□□ 0.79
PHRF1-204ENST00000532550 TLR3O15455 904 aaKnown RBP19.98■□□□□ 0.79
PHRF1-204ENST00000532550 CYTH3O43739 400 aa19.98■□□□□ 0.79
PHRF1-204ENST00000532550 PPP1R11O60927 126 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-204ENST00000532550 TXNP10599 105 aaKnown RBP19.98■□□□□ 0.79
PHRF1-204ENST00000532550 TTLL4Q14679 1199 aa19.98■□□□□ 0.79
PHRF1-204ENST00000532550 PPP2R5BQ15173 497 aa19.98■□□□□ 0.79
PHRF1-204ENST00000532550 BRDTQ58F21 947 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-204ENST00000532550 SAMD3Q8N6K7 520 aa19.98■□□□□ 0.79
PHRF1-204ENST00000532550 OR6J1Q8NGC5 347 aa19.98■□□□□ 0.79
PHRF1-204ENST00000532550 LRRC37A2A6NM11 1700 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 SOX1O00570 391 aaPredicted RBP19.97■□□□□ 0.79
PHRF1-204ENST00000532550 LIFRP42702 1097 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 GNAQP50148 359 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 CPT1AP50416 773 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 HSD17B4P51659 736 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 SLC35G1Q2M3R5 365 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 PIBF1Q8WXW3 757 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 NEK1Q96PY6 1258 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 LZTS2Q9BRK4 669 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 MYL10Q9BUA6 226 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 SEZ6LQ9BYH1 1024 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 POLR3EQ9NVU0 708 aa19.97■□□□□ 0.79
PHRF1-204ENST00000532550 CALM1P0DP23 149 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 CALM2P0DP24 149 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 CALM3P0DP25 149 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 EIF2AK2P19525 551 aaKnown RBP19.96■□□□□ 0.79
PHRF1-204ENST00000532550 SMARCA1P28370 1054 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 ITGA7Q13683 1181 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 SEPT14Q6ZU15 432 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 RRP36Q96EU6 259 aaKnown RBP19.96■□□□□ 0.79
PHRF1-204ENST00000532550 LRCH3Q96II8 777 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 SLC12A7Q9Y666 1083 aa19.96■□□□□ 0.79
PHRF1-204ENST00000532550 SZT2Q5T011 3432 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 GCOM1H8Y6P7 765 aaPredicted RBP19.95■□□□□ 0.78
PHRF1-204ENST00000532550 OPLAHO14841 1288 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 EIF3JO75822 258 aaKnown RBP19.95■□□□□ 0.78
PHRF1-204ENST00000532550 NR3C2P08235 984 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 POLR2MP0CAP2 368 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 ITGB8P26012 769 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 GHRHRQ02643 423 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 SYNE3Q6ZMZ3 975 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 LRRC2Q9BYS8 371 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 PXMP2Q9NR77 195 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 LAMA3Q16787 3333 aa19.95■□□□□ 0.78
PHRF1-204ENST00000532550 TIMP1P01033 207 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 MYL3P08590 195 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 HOXA13P31271 388 aaPredicted RBP19.94■□□□□ 0.78
PHRF1-204ENST00000532550 KRT32Q14532 448 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 TSGA10IPQ3SY00 556 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 FAM126BQ8IXS8 530 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 SLC43A3Q8NBI5 491 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 COPS5Q92905 334 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 SPZ1Q9BXG8 430 aa19.94■□□□□ 0.78
PHRF1-204ENST00000532550 SEC63Q9UGP8 760 aaKnown RBP19.94■□□□□ 0.78
PHRF1-204ENST00000532550 LTBP2Q14767 1821 aa19.93■□□□□ 0.78
PHRF1-204ENST00000532550 KPNA6O60684 536 aa19.93■□□□□ 0.78
PHRF1-204ENST00000532550 MYCLP12524 364 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-204ENST00000532550 PSMC6P62333 389 aa19.93■□□□□ 0.78
PHRF1-204ENST00000532550 COL9A3Q14050 684 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-204ENST00000532550 SHHQ15465 462 aa19.93■□□□□ 0.78
PHRF1-204ENST00000532550 CCDC62Q6P9F0 684 aa19.93■□□□□ 0.78
PHRF1-204ENST00000532550 FCHSD1Q86WN1 690 aa19.93■□□□□ 0.78
PHRF1-204ENST00000532550 TBX21Q9UL17 535 aa19.93■□□□□ 0.78
PHRF1-204ENST00000532550 A6NJR5 290 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 ARIH2O95376 493 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 GH1P01241 217 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 RXRAP19793 462 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 PURAQ00577 322 aaKnown RBP19.92■□□□□ 0.78
PHRF1-204ENST00000532550 FPGSQ05932 587 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 LY6KQ17RY6 165 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 GPR153Q6NV75 609 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 DHX32Q7L7V1 743 aaKnown RBP19.92■□□□□ 0.78
PHRF1-204ENST00000532550 RASEFQ8IZ41 740 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
PHRF1-204ENST00000532550 FANCBQ8NB91 859 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 PDCD2LQ9BRP1 358 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 MTG1Q9BT17 334 aaPredicted RBP19.92■□□□□ 0.78
PHRF1-204ENST00000532550 GRIN2DO15399 1336 aa19.92■□□□□ 0.78
PHRF1-204ENST00000532550 PLEKHA8P1O95397 391 aa19.91■□□□□ 0.78
PHRF1-204ENST00000532550 CD4P01730 458 aa19.91■□□□□ 0.78
PHRF1-204ENST00000532550 EXOSC10Q01780 885 aaKnown RBP19.91■□□□□ 0.78
PHRF1-204ENST00000532550 MFSD5Q6N075 450 aa19.91■□□□□ 0.78
PHRF1-204ENST00000532550 SGMS1Q86VZ5 419 aa19.91■□□□□ 0.78
PHRF1-204ENST00000532550 CMTR1Q8N1G2 835 aaKnown RBP19.91■□□□□ 0.78
PHRF1-204ENST00000532550 KIAA1217Q5T5P2 1943 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 HMGB1P09429 215 aaKnown RBP19.9■□□□□ 0.78
PHRF1-204ENST00000532550 PGM5Q15124 567 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 ADCK5Q3MIX3 580 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 C9orf50Q5SZB4 431 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 KCNV1Q6PIU1 500 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 VSIG10LQ86VR7 867 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 RAB11FIP4Q86YS3 637 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 CCDC82Q8N4S0 544 aa19.9■□□□□ 0.78
PHRF1-204ENST00000532550 TMEM199Q8N511 208 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms