RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 RTN1Q16799 776 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 C1orf53Q5VUE5 145 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 BRF1Q92994 677 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 UBE2OQ9C0C9 1292 aaKnown RBP12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 XPNPEP3Q9NQH7 507 aa12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 ZHX1Q9UKY1 873 aaPredicted RBP12.5□□□□□ -0.41
GPATCH4-216ENST00000531900 FRMPD4Q14CM0 1322 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 CNTNAP5Q8WYK1 1306 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 hCG_1984214I3L0E3 225 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 CTAGE5O15320 804 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 TOB2Q14106 344 aaPredicted RBP12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 SNX17Q15036 470 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 DUSP28Q4G0W2 176 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 SLC39A5Q6ZMH5 540 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 RNF180Q86T96 592 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 ZNF713Q8N859 430 aaPredicted RBP12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 ZNF274Q96GC6 653 aaPredicted RBP12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 PHF24Q9UPV7 400 aa12.49□□□□□ -0.41
GPATCH4-216ENST00000531900 SYNRGQ9UMZ2 1314 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 MOXD2PA6NHM9 499 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 GOLGA8BA8MQT2 603 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 GCOM1H8Y6P7 765 aaPredicted RBP12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 MEIS2O14770 477 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 EIF3JO75822 258 aaKnown RBP12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 CFBP00751 764 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 POLR2MP0CAP2 368 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 PDIA3P30101 505 aaKnown RBP12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 CDC27P30260 824 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 ADCYAP1R1P41586 468 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 RTP1P59025 263 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 FGD1P98174 961 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 TNFAIP2Q03169 654 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 PDE4DQ08499 809 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 APOBRQ0VD83 1088 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 NTRK3Q16288 839 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 C8orf34Q49A92 452 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 VSIG10LQ86VR7 867 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 TDHQ8IZJ6 230 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 CMTR1Q8N1G2 835 aaKnown RBP12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 PXMP2Q9NR77 195 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 PDGFCQ9NRA1 345 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 ATP11BQ9Y2G3 1177 aa12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 LAMA2P24043 3122 aaKnown RBP12.48□□□□□ -0.41
GPATCH4-216ENST00000531900 LAMA3Q16787 3333 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 SEC24BO95487 1268 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 PGK1P00558 417 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 NR3C2P08235 984 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 SMPD1P17405 629 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 ADD1P35611 737 aaKnown RBP12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 MDM2Q00987 491 aaPredicted RBP12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 STXBP2Q15833 593 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 RAB11FIP4Q86YS3 637 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 FBXO16Q8IX29 292 aaPredicted RBP12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 PCSK9Q8NBP7 692 aaKnown RBP12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 SCFD2Q8WU76 684 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 PDCD2LQ9BRP1 358 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
GPATCH4-216ENST00000531900 ELP1O95163 1332 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 STAM2O75886 525 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 IFNAR1P17181 557 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 LRIT3Q3SXY7 679 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 ARHGEF16Q5VV41 709 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 XRRA1Q6P2D8 792 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 FERMT2Q96AC1 680 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 LENG1Q96BZ8 264 aaPredicted RBP12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 WDR11Q9BZH6 1224 aa12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 UPF3BQ9BZI7 483 aaKnown RBP12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.41
GPATCH4-216ENST00000531900 SOX1O00570 391 aaPredicted RBP12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 RGS20O76081 388 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 TGFB3P10600 412 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 HOXA13P31271 388 aaPredicted RBP12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 ACLYP53396 1101 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 TTLL4Q14679 1199 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 PGM5Q15124 567 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 PFKFB3Q16875 520 aaPredicted RBP12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 KCNV1Q6PIU1 500 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 CCDC82Q8N4S0 544 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 LRCH3Q96II8 777 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 RNF26Q9BY78 433 aaPredicted RBP12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 SEZ6LQ9BYH1 1024 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 GLT8D2Q9H1C3 349 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 BARHL2Q9NY43 387 aa12.45□□□□□ -0.42
GPATCH4-216ENST00000531900 MYH7BA7E2Y1 1941 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms