RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 KCNK3O14649 394 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 HERVK_113P62684 666 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 ITPK1Q13572 414 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 MTRQ99707 1265 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 PACSIN2Q9UNF0 486 aaPredicted RBP12.54□□□□□ -0.4
NXF1-211ENST00000531709 SLIT3O75094 1523 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 MAP2K7O14733 419 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 ORC4O43929 436 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 SRGNP10124 158 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 MAN2A1Q16706 1144 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 CCDC155Q8N6L0 562 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 UBLCP1Q8WVY7 318 aaPredicted RBP12.54□□□□□ -0.4
NXF1-211ENST00000531709 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 NFU1Q9UMS0 254 aa12.54□□□□□ -0.4
NXF1-211ENST00000531709 SMIM23A6NLE4 172 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 ERLIN2O94905 339 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 INPP5BP32019 993 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 USP8P40818 1118 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 EZH2Q15910 746 aaKnown RBP12.53□□□□□ -0.4
NXF1-211ENST00000531709 E2F4Q16254 413 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 TRAPPC11Q7Z392 1133 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 CCDC65Q8IXS2 484 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 PCDHA12Q9UN75 941 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 PSMD14O00487 310 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 HEXIM1O94992 359 aaKnown RBP12.53□□□□□ -0.4
NXF1-211ENST00000531709 SLC16A2P36021 539 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 UBE2SQ16763 222 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 MFSD14BQ5SR56 506 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 TBC1D9BQ66K14 1250 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 GIMAP8Q8ND71 665 aaPredicted RBP12.53□□□□□ -0.4
NXF1-211ENST00000531709 IPO4Q8TEX9 1081 aaKnown RBP12.53□□□□□ -0.4
NXF1-211ENST00000531709 GJA10Q969M2 543 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 AK8Q96MA6 479 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 BARHL2Q9NY43 387 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 LAD1O00515 517 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
NXF1-211ENST00000531709 SPATA4Q8NEY3 305 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 PPANQ9NQ55 473 aaKnown RBP12.53□□□□□ -0.4
NXF1-211ENST00000531709 HPCAL4Q9UM19 191 aa12.53□□□□□ -0.4
NXF1-211ENST00000531709 TLDC2A0PJX2 215 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 ADAMTS3O15072 1205 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 RHOBTB3O94955 611 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 TNNC1P63316 161 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 ASIC2Q16515 512 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 FAM26FQ5R3K3 315 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 CUEDC2Q9H467 287 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 PANK4Q9NVE7 773 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 FAM53CQ9NYF3 392 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 GOLGA6L7A0A1B0GV03 622 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 CETN3O15182 167 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 MYL1P05976 194 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 PDCLQ13371 301 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 CEP85LQ5SZL2 805 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 CCNI2Q6ZMN8 369 aaPredicted RBP12.52□□□□□ -0.4
NXF1-211ENST00000531709 APTXQ7Z2E3 356 aaKnown RBP12.52□□□□□ -0.4
NXF1-211ENST00000531709 TXNRD3Q86VQ6 643 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 SLF2Q8IX21 1173 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 FNBP4Q8N3X1 1017 aaPredicted RBP12.52□□□□□ -0.4
NXF1-211ENST00000531709 FAM133AQ8N9E0 248 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 DDX12PQ92771 950 aa12.52□□□□□ -0.4
NXF1-211ENST00000531709 PBX1P40424 430 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
NXF1-211ENST00000531709 PAK2Q13177 524 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 KCNB1Q14721 858 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 RPS6KA1Q15418 735 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 CAPN6Q9Y6Q1 641 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 USP17L5A8MUK1 530 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 TDP2O95551 362 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 CDK8P49336 464 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 ADAM9Q13443 819 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.41
NXF1-211ENST00000531709 STIM2Q9P246 746 aa12.52□□□□□ -0.41
NXF1-211ENST00000531709 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
NXF1-211ENST00000531709 DMGDHQ9UI17 866 aaKnown RBP12.52□□□□□ -0.41
NXF1-211ENST00000531709 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 FUT2Q10981 343 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 PLS1Q14651 629 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 GPBP1Q86WP2 473 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 TBCAO75347 108 aaKnown RBP12.51□□□□□ -0.41
NXF1-211ENST00000531709 EPHB4P54760 987 aa12.51□□□□□ -0.41
NXF1-211ENST00000531709 GRM4Q14833 912 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms