RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ASTN1O14525 1302 aa19.4■□□□□ 0.7
SF3B2-211ENST00000531041 FRMPD4Q14CM0 1322 aa19.39■□□□□ 0.69
SF3B2-211ENST00000531041 SPDYE3A6NKU9 549 aa19.39■□□□□ 0.69
SF3B2-211ENST00000531041 GUCY1B3Q02153 619 aa19.39■□□□□ 0.69
SF3B2-211ENST00000531041 CTU1Q7Z7A3 348 aaKnown RBP19.39■□□□□ 0.69
SF3B2-211ENST00000531041 TRMT44Q8IYL2 757 aaKnown RBP19.39■□□□□ 0.69
SF3B2-211ENST00000531041 NSUN6Q8TEA1 469 aaKnown RBP19.39■□□□□ 0.69
SF3B2-211ENST00000531041 RMDN3Q96TC7 470 aa19.39■□□□□ 0.69
SF3B2-211ENST00000531041 BRMS1Q9HCU9 246 aa19.39■□□□□ 0.69
SF3B2-211ENST00000531041 BIN2Q9UBW5 565 aaPredicted RBP19.39■□□□□ 0.69
SF3B2-211ENST00000531041 IGHA2P01877 340 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 KRT2P35908 639 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 ALDH5A1P51649 535 aaPredicted RBP19.38■□□□□ 0.69
SF3B2-211ENST00000531041 SAFBQ15424 915 aaKnown RBP eCLIP19.38■□□□□ 0.69
SF3B2-211ENST00000531041 OLFML2BQ68BL8 750 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 MAMDC4Q6UXC1 1216 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 MSL3Q8N5Y2 521 aaKnown RBP19.38■□□□□ 0.69
SF3B2-211ENST00000531041 SPRYD3Q8NCJ5 442 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 RAET1EQ8TD07 263 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 PXMP2Q9NR77 195 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 TMEM260Q9NX78 707 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 PCDHA6Q9UN73 950 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 PTPN22Q9Y2R2 807 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 PCDHA8Q9Y5H6 950 aa19.38■□□□□ 0.69
SF3B2-211ENST00000531041 RPTORQ8N122 1335 aa19.37■□□□□ 0.69
SF3B2-211ENST00000531041 CCL14Q16627 93 aa19.37■□□□□ 0.69
SF3B2-211ENST00000531041 ARHGEF16Q5VV41 709 aa19.37■□□□□ 0.69
SF3B2-211ENST00000531041 JAKMIP3Q5VZ66 844 aa19.37■□□□□ 0.69
SF3B2-211ENST00000531041 DIS3L2Q8IYB7 885 aaKnown RBP19.37■□□□□ 0.69
SF3B2-211ENST00000531041 PXYLP1Q8TE99 480 aa19.37■□□□□ 0.69
SF3B2-211ENST00000531041 IWS1Q96ST2 819 aa19.37■□□□□ 0.69
SF3B2-211ENST00000531041 SYNGAP1Q96PV0 1343 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 ASB14A6NK59 587 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 B4DLN1 442 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 H3BQV1 296 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 ADCY3O60266 1144 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
SF3B2-211ENST00000531041 SYT1P21579 422 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 EDNRBP24530 442 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 PKN2Q16513 984 aaKnown RBP19.36■□□□□ 0.69
SF3B2-211ENST00000531041 IFFO2Q5TF58 517 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 RASGRP4Q8TDF6 673 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 OXER1Q8TDS5 423 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 MORC4Q8TE76 937 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 MPHOSPH6Q99547 160 aaKnown RBP19.36■□□□□ 0.69
SF3B2-211ENST00000531041 PDCD2LQ9BRP1 358 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 TINF2Q9BSI4 451 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 ANO3Q9BYT9 981 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 EHMT1Q9H9B1 1298 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 FLRT1Q9NZU1 646 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 MYH15Q9Y2K3 1946 aa19.36■□□□□ 0.69
SF3B2-211ENST00000531041 BTBD18B2RXH4 712 aa19.35■□□□□ 0.69
SF3B2-211ENST00000531041 NR5A1Q13285 461 aa19.35■□□□□ 0.69
SF3B2-211ENST00000531041 PGM5Q15124 567 aa19.35■□□□□ 0.69
SF3B2-211ENST00000531041 TRIB2Q92519 343 aa19.35■□□□□ 0.69
SF3B2-211ENST00000531041 TNFRSF25Q93038 417 aa19.35■□□□□ 0.69
SF3B2-211ENST00000531041 FOXP1Q9H334 677 aaPredicted RBP19.35■□□□□ 0.69
SF3B2-211ENST00000531041 PTCH2Q9Y6C5 1203 aa19.35■□□□□ 0.69
SF3B2-211ENST00000531041 NR3C2P08235 984 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 EIF2AK2P19525 551 aaKnown RBP19.34■□□□□ 0.69
SF3B2-211ENST00000531041 SREBF1P36956 1147 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 KRT25Q7Z3Z0 450 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 SLAIN1Q8ND83 568 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 PGBD1Q96JS3 809 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 U2AF2P26368 475 aaKnown RBP eCLIP19.34■□□□□ 0.69
SF3B2-211ENST00000531041 GRK4P32298 578 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 PCNX4Q63HM2 1172 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 FBXO46Q6PJ61 603 aaPredicted RBP19.34■□□□□ 0.69
SF3B2-211ENST00000531041 ARMCX2Q7L311 632 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 VSIG10LQ86VR7 867 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 IL31RAQ8NI17 732 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 CRYGNQ8WXF5 182 aa19.34■□□□□ 0.69
SF3B2-211ENST00000531041 CCDC194A0A1B0GVG4 234 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 STX6O43752 255 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 SNAI1O95863 264 aaPredicted RBP19.33■□□□□ 0.68
SF3B2-211ENST00000531041 ELNP15502 786 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 CCND2P30279 289 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 UBXN2AP68543 259 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 PDE4DQ08499 809 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 NONOQ15233 471 aaKnown RBP eCLIP19.33■□□□□ 0.68
SF3B2-211ENST00000531041 MFSD14CQ5VZR4 134 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 XRRA1Q6P2D8 792 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.33■□□□□ 0.68
SF3B2-211ENST00000531041 DAXXQ9UER7 740 aaPredicted RBP19.33■□□□□ 0.68
SF3B2-211ENST00000531041 HTTP42858 3142 aa19.33■□□□□ 0.68
SF3B2-211ENST00000531041 VPS37CA5D8V6 355 aaPredicted RBP19.32■□□□□ 0.68
SF3B2-211ENST00000531041 STAM2O75886 525 aa19.32■□□□□ 0.68
SF3B2-211ENST00000531041 HMGCRP04035 888 aa19.32■□□□□ 0.68
SF3B2-211ENST00000531041 CYP2C19P33261 490 aa19.32■□□□□ 0.68
SF3B2-211ENST00000531041 ARHGAP4P98171 946 aa19.32■□□□□ 0.68
SF3B2-211ENST00000531041 STXBP2Q15833 593 aa19.32■□□□□ 0.68
SF3B2-211ENST00000531041 DDX49Q9Y6V7 483 aaKnown RBP19.32■□□□□ 0.68
SF3B2-211ENST00000531041 DOCK5Q9H7D0 1870 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 EIF3JO75822 258 aaKnown RBP19.31■□□□□ 0.68
SF3B2-211ENST00000531041 CYP3A4P08684 503 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 MYCLP12524 364 aaPredicted RBP19.31■□□□□ 0.68
SF3B2-211ENST00000531041 USP11P51784 963 aa19.31■□□□□ 0.68
SF3B2-211ENST00000531041 MRPS9P82933 396 aaKnown RBP19.31■□□□□ 0.68
SF3B2-211ENST00000531041 GNL2Q13823 731 aaKnown RBP19.31■□□□□ 0.68
SF3B2-211ENST00000531041 EARS2Q5JPH6 523 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms