RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CYP39A1Q9NYL5 469 aa12.15□□□□□ -0.46
SOX6-213ENST00000530378 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
SOX6-213ENST00000530378 PIK3CDO00329 1044 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 TLR2O60603 784 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 TDP2O95551 362 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 BCRP11274 1271 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 KRT85P78386 507 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 CCNA1P78396 465 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 SF3A1Q15459 793 aaKnown RBP12.14□□□□□ -0.47
SOX6-213ENST00000530378 FAM177A1Q8N128 213 aaPredicted RBP12.14□□□□□ -0.47
SOX6-213ENST00000530378 MMP19Q99542 508 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 MORF4L1Q9UBU8 362 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 PNMA2Q9UL42 364 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 CA12O43570 354 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
SOX6-213ENST00000530378 SLC25A27O95847 323 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 AP3B2Q13367 1082 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 NEK8Q86SG6 692 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 RGS22Q8NE09 1264 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 ZNF396Q96N95 335 aaPredicted RBP12.14□□□□□ -0.47
SOX6-213ENST00000530378 RMDN3Q96TC7 470 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 ZCCHC17Q9NP64 241 aaKnown RBP12.14□□□□□ -0.47
SOX6-213ENST00000530378 FBXO40Q9UH90 709 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 TSKSQ9UJT2 592 aa12.14□□□□□ -0.47
SOX6-213ENST00000530378 LRRC37A2A6NM11 1700 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 DOCK5Q9H7D0 1870 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 EDIL3O43854 480 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 MYCLP12524 364 aaPredicted RBP12.13□□□□□ -0.47
SOX6-213ENST00000530378 MARCKSP29966 332 aaPredicted RBP12.13□□□□□ -0.47
SOX6-213ENST00000530378 ARHGAP4P98171 946 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 KCTD2Q14681 263 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 STK38Q15208 465 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 RILPL1Q5EBL4 403 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 C17orf99Q6UX52 265 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 GPR142Q7Z601 462 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 GJA10Q969M2 543 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 GBP4Q96PP9 640 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 ARHGAP39Q9C0H5 1083 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 MROH8Q9H579 483 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 ASTN1O14525 1302 aa12.13□□□□□ -0.47
SOX6-213ENST00000530378 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 SLC37A4O43826 429 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 FCER1AP12319 257 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 ARHGEF16Q5VV41 709 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 SHCBP1Q8NEM2 672 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 CYP2W1Q8TAV3 490 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 SPATA32Q96LK8 384 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 RNF186Q9NXI6 227 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 PFASO15067 1338 aa12.12□□□□□ -0.47
SOX6-213ENST00000530378 FOSP01100 380 aaPredicted RBP12.11□□□□□ -0.47
SOX6-213ENST00000530378 ADORA2AP29274 412 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 CTGFP29279 349 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 MAP2K2P36507 400 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 ZNF76P36508 570 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 SREBF1P36956 1147 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 POTEHQ6S545 545 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 LEO1Q8WVC0 666 aaPredicted RBP12.11□□□□□ -0.47
SOX6-213ENST00000530378 TMEM60Q9H2L4 133 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 PXMP2Q9NR77 195 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 RTEL1Q9NZ71 1219 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 PKD2L1Q9P0L9 805 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 RPTORQ8N122 1335 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 FAM86B1E9PN63 330 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
SOX6-213ENST00000530378 ALDH1A1P00352 501 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 FAM86B2P0C5J1 330 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 COPB2P35606 906 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 GHRHRQ02643 423 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 PGM5Q15124 567 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 PRR16Q569H4 304 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 PLEKHH3Q7Z736 793 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 EHMT1Q9H9B1 1298 aa12.11□□□□□ -0.47
SOX6-213ENST00000530378 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.11□□□□□ -0.47
SOX6-213ENST00000530378 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 COBLO75128 1261 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
SOX6-213ENST00000530378 MAPK4P31152 587 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 ME1P48163 572 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 NASPP49321 788 aaPredicted RBP12.1□□□□□ -0.47
SOX6-213ENST00000530378 CAP1Q01518 475 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 PTGDRQ13258 359 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 PTPAQ15257 358 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 PDCD2LQ9BRP1 358 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
SOX6-213ENST00000530378 CFAP45Q9UL16 551 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 HTTP42858 3142 aa12.1□□□□□ -0.47
SOX6-213ENST00000530378 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
SOX6-213ENST00000530378 SPTLC2O15270 562 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 NEMFO60524 1076 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 PTPREP23469 700 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 TRAPPC10P48553 1259 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 ALDH5A1P51649 535 aaPredicted RBP12.09□□□□□ -0.47
SOX6-213ENST00000530378 GRIN1Q05586 938 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 EEPD1Q7L9B9 569 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 FAM133AQ8N9E0 248 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 LINC00301Q8NCQ3 95 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms