RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 HYOU1Q9Y4L1 999 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 KNDC1Q76NI1 1749 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 RPS6KA4O75676 772 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 SEPT7Q16181 437 aaKnown RBP13.65□□□□□ -0.22
SCN3B-206ENST00000530277 SLC30A10Q6XR72 485 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 DGKHQ86XP1 1220 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 MAP3K14Q99558 947 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 PHF20Q9BVI0 1012 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 PCIF1Q9H4Z3 704 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 FAM204AQ9H8W3 233 aa13.65□□□□□ -0.22
SCN3B-206ENST00000530277 STK36Q9NRP7 1315 aa13.65□□□□□ -0.23
SCN3B-206ENST00000530277 A0A087X0B3 334 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 GOLGA6L7A0A1B0GV03 622 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 POTEB3A0JP26 581 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 POTECB2RU33 542 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 NDUFAB1O14561 156 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 CCNE1P24864 410 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 TRAPPC10P48553 1259 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 TERF2Q15554 542 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 POTEBQ6S5H4 581 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 CCDC50Q8IVM0 306 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 CSRNP1Q96S65 589 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 NDST4Q9H3R1 872 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 GAS7O60861 476 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 ALAS1P13196 640 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 PEX26Q7Z412 305 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 CCDC51Q96ER9 411 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 KRT12Q99456 494 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 FRMD4BQ9Y2L6 1034 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 TAL1P17542 331 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 TNFAIP3P21580 790 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 RPL13P26373 211 aaKnown RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 IRX3P78415 501 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 RPS6KA1Q15418 735 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 CLEC4GQ6UXB4 293 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 RBM43Q6ZSC3 357 aaKnown RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 STXBP4Q6ZWJ1 553 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 AGXT2Q9BYV1 514 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 BHMT2Q9H2M3 363 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 TDRD3Q9H7E2 651 aaKnown RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 CTTNBP2NLQ9P2B4 639 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 H0YIN7 160 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 EBAG9O00559 213 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 WNT7AO00755 349 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 TTLL1O95922 423 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 CTNNA2P26232 953 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 MNAT1P51948 309 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 BIRC3Q13489 604 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 SLC51AQ86UW1 340 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 FBXO11Q86XK2 927 aa13.64□□□□□ -0.23
SCN3B-206ENST00000530277 TAB3Q8N5C8 712 aaPredicted RBP13.64□□□□□ -0.23
SCN3B-206ENST00000530277 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 SPOPO43791 374 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 GFPT1Q06210 699 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 CTTNQ14247 550 aaKnown RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 SEPT2Q15019 361 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 C12orf60Q5U649 245 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 CC2D1AQ6P1N0 951 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 SEPT12Q8IYM1 358 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 NYAP1Q6ZVC0 841 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 DNAAF5Q86Y56 855 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 PPANQ9NQ55 473 aaKnown RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 TESPA1A2RU30 521 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 GYPCP04921 128 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 MMP10P09238 476 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 BMP6P22004 513 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 MAP2K1Q02750 393 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 WHAMMP3Q1A5X7 153 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 BPIFA3Q9BQP9 254 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 QTRT2Q9H974 415 aaKnown RBP13.63□□□□□ -0.23
SCN3B-206ENST00000530277 GINS2Q9Y248 185 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 DUSP10Q9Y6W6 482 aa13.63□□□□□ -0.23
SCN3B-206ENST00000530277 ATP1A1P05023 1023 aaKnown RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 KIF11P52732 1056 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 BRD3Q15059 726 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 PANX2Q96RD6 677 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 ADD3Q9UEY8 706 aaKnown RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 FAM205AQ6ZU69 1335 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 TCRBV5S4A2TA0A5A2 114 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 BUB1BO60566 1050 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 TADA3O75528 432 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
SCN3B-206ENST00000530277 CASP8Q14790 479 aa13.62□□□□□ -0.23
SCN3B-206ENST00000530277 ABCB5Q2M3G0 1257 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms