RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 SDCCAG3Q96C92 435 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 RUNDC3BQ96NL0 473 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 C19orf44Q9H6X5 657 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 IRAK4Q9NWZ3 460 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 SCINQ9Y6U3 715 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 GPC4O75487 556 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 KRT3P12035 628 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 HIBADHP31937 336 aaKnown RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 EIF4A3P38919 411 aaKnown RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 MYO1EQ12965 1108 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 SLC39A14Q15043 492 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 EXOC3L4Q17RC7 722 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 ALS2CLQ60I27 953 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 CPXCR1Q8N123 301 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 PLBD2Q8NHP8 589 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 SSH2Q76I76 1423 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 RASGRF2O14827 1237 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 SORBS3O60504 671 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 NDUFA10O95299 355 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 DLATP10515 647 aaKnown RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 ESRRAP11474 423 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 CDC25AP30304 524 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 SLC1A4P43007 532 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 PDE6CP51160 858 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 PDE1BQ01064 536 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 GCKRQ14397 625 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 ANKRD35Q8N283 1001 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 FAM133AQ8N9E0 248 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 CCDC138Q96M89 665 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 MLXIPLQ9NP71 852 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 TTC4O95801 387 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 FGAP02671 866 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 GCP02774 474 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 CACNB1Q02641 598 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 BEND6Q5SZJ8 279 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 GABPB2Q8TAK5 448 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 TGFBRAP1Q8WUH2 860 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 SDR42E1Q8WUS8 393 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 HDAC11Q96DB2 347 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 CENPKQ9BS16 269 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 USP44Q9H0E7 712 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 WDR70Q9NW82 654 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 BZW2Q9Y6E2 419 aaKnown RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 ESYT2A0FGR8 921 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 ACSL3O95573 720 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 A1BGP04217 495 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 KCNA6P17658 529 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 EEF1DP29692 281 aaKnown RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 FAM47EQ6ZV65 393 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 TRMT10CQ7L0Y3 403 aaKnown RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 ST13P4Q8IZP2 240 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 CCDC24Q8N4L8 307 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 TRIML2Q8N7C3 387 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 MAML1Q92585 1016 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 NT5C3AQ9H0P0 336 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 FRMPD2Q68DX3 1309 aaPredicted RBP8.3□□□□□ -1.08
CTNND1-223ENST00000529986 PCDH11XQ9BZA7 1347 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 PCDH11YQ9BZA8 1340 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 MLH3Q9UHC1 1453 aa8.3□□□□□ -1.08
CTNND1-223ENST00000529986 H7C0C1 242 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 TOM1L1O75674 476 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 STAM2O75886 525 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 OR52Z1P0C646 297 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 NCF2P19878 526 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ATP5OP48047 213 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 TBC1D10BQ4KMP7 808 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 SGO2Q562F6 1265 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ZNF790Q6PG37 636 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 CCDC125Q86Z20 511 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 POMGNT1Q8WZA1 660 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 CNOT10Q9H9A5 744 aaKnown RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ANAPC5Q9UJX4 755 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ABCC4O15439 1325 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 UNC13BO14795 1591 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 TMEM232C9JQI7 657 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 DNAJC6O75061 913 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 LRRN2O75325 713 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 PRPF6O94906 941 aaKnown RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 MMEP08473 750 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 IL2RBP14784 551 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ATP7BP35670 1465 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 CCDC144BQ3MJ40 725 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 FAM26FQ5R3K3 315 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 FAM102BQ5T8I3 360 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 TRPM1Q7Z4N2 1603 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 NSUN7Q8NE18 718 aaKnown RBP8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ANKFY1Q9P2R3 1169 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 TMEM2Q9UHN6 1383 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 NUB1Q9Y5A7 615 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 CARMIL3Q8ND23 1372 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 RSPH3Q86UC2 560 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 NEK9Q8TD19 979 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 RASGRP4Q8TDF6 673 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 ANGPTL2Q9UKU9 493 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 PCDHA12Q9UN75 941 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 PCDHA13Q9Y5I0 950 aa8.29□□□□□ -1.08
CTNND1-223ENST00000529986 KDRP35968 1356 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms