RNA–Protein interactions for RNA: ENST00000529802.1

FOXRED1-209, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-209ENST00000529802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.22
FOXRED1-209ENST00000529802 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
FOXRED1-209ENST00000529802 MSL3Q8N5Y2 521 aaKnown RBP16.4■□□□□ 0.22
FOXRED1-209ENST00000529802 CTCFLQ8NI51 663 aaPredicted RBP16.4■□□□□ 0.22
FOXRED1-209ENST00000529802 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
FOXRED1-209ENST00000529802 UPF3AQ9H1J1 476 aaKnown RBP16.4■□□□□ 0.22
FOXRED1-209ENST00000529802 TAF6LQ9Y6J9 622 aa16.4■□□□□ 0.22
FOXRED1-209ENST00000529802 CD4P01730 458 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 GOLGA8HP0CJ92 632 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 ALAS1P13196 640 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 ANTXR2P58335 489 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 PPP2R2DQ66LE6 453 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 TTBK2Q6IQ55 1244 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 MAMDC4Q6UXC1 1216 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 CHST3Q7LGC8 479 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 OTOP2Q7RTS6 562 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 PCSK9Q8NBP7 692 aaKnown RBP16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 IGDCC4Q8TDY8 1250 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 TRERF1Q96PN7 1200 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 LRFN3Q9BTN0 628 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 TSPYL2Q9H2G4 693 aaPredicted RBP16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 EPHX3Q9H6B9 360 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 RNF146Q9NTX7 359 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 HCN4Q9Y3Q4 1203 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 SLC12A7Q9Y666 1083 aa16.39■□□□□ 0.21
FOXRED1-209ENST00000529802 DNAJC25-GNG10A0A024R161 153 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 KLRF2D3W0D1 207 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 TLR3O15455 904 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 MYOGP15173 224 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 GNAQP50148 359 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 GJA9P57773 515 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 GRM4Q14833 912 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 RASGRP2Q7LDG7 609 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 KCNB2Q92953 911 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 MAF1Q9H063 256 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 MTIF3Q9H2K0 278 aaKnown RBP16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 LY9Q9HBG7 655 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 HOMER2Q9NSB8 354 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 RIPK3Q9Y572 518 aa16.38■□□□□ 0.21
FOXRED1-209ENST00000529802 CTAGE5O15320 804 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 FGBP02675 491 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 ACVR2BQ13705 512 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 SKIV2LQ15477 1246 aaKnown RBP16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 FGD4Q96M96 766 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 AGBL1Q96MI9 1066 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 HIPK3Q9H422 1215 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 ZNF536O15090 1300 aa16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
FOXRED1-209ENST00000529802 CCL23P55773 120 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 TROAPQ12815 778 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 CDC37Q16543 378 aaPredicted RBP16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 AAK1Q2M2I8 961 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 GNASQ5JWF2 1037 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 RASEFQ8IZ41 740 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 ADGRF4Q8IZF3 695 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 MPHOSPH6Q99547 160 aaKnown RBP16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 UBA5Q9GZZ9 404 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 WNT8AQ9H1J5 351 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 MAD2L2Q9UI95 211 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 ABCB11O95342 1321 aa16.36■□□□□ 0.21
FOXRED1-209ENST00000529802 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 SMARCA1P28370 1054 aa16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 BEX3Q00994 111 aa16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 ZNF467Q7Z7K2 595 aaPredicted RBP16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 FBXO11Q86XK2 927 aa16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 MCF2L2Q86YR7 1114 aa16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 VWCEQ96DN2 955 aa16.35■□□□□ 0.21
FOXRED1-209ENST00000529802 COL4A4P53420 1690 aaPredicted RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 B4DLN1 442 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 RFXAPO00287 272 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 ZBTB5O15062 677 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 MRPL12P52815 198 aaKnown RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 RCAN1P53805 252 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 SNAP25P60880 206 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 EXOSC10Q01780 885 aaKnown RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 PPP2R5BQ15173 497 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 ADCK5Q3MIX3 580 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 CXCL17Q6UXB2 119 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 ARMCX2Q7L311 632 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 SLC43A3Q8NBI5 491 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 KHSRPQ92945 711 aaKnown RBP eCLIP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 NOC4LQ9BVI4 516 aaKnown RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 AMNQ9BXJ7 453 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 KATNBL1Q9H079 304 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 VAT1LQ9HCJ6 419 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms