RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 CUL5Q93034 780 aa16.09■□□□□ 0.17
USF1-209ENST00000529476 ZMYND12Q9H0C1 365 aa16.09■□□□□ 0.17
USF1-209ENST00000529476 MAP3K20Q9NYL2 800 aaKnown RBP16.09■□□□□ 0.17
USF1-209ENST00000529476 MYCP01106 439 aaPredicted RBP16.08■□□□□ 0.16
USF1-209ENST00000529476 IGHA2P01877 340 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 CYP2C19P33261 490 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
USF1-209ENST00000529476 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
USF1-209ENST00000529476 NLRP5P59047 1200 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 HMGN5P82970 282 aaKnown RBP16.08■□□□□ 0.16
USF1-209ENST00000529476 TRIM32Q13049 653 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 ZNF467Q7Z7K2 595 aaPredicted RBP16.08■□□□□ 0.16
USF1-209ENST00000529476 TRMT44Q8IYL2 757 aaKnown RBP16.08■□□□□ 0.16
USF1-209ENST00000529476 RMDN3Q96TC7 470 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 C6orf50Q9HD87 102 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 ADD3Q9UEY8 706 aaKnown RBP16.08■□□□□ 0.16
USF1-209ENST00000529476 KCNJ14Q9UNX9 436 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.16
USF1-209ENST00000529476 HMGCRP04035 888 aa16.07■□□□□ 0.16
USF1-209ENST00000529476 SLC9C1Q4G0N8 1177 aa16.07■□□□□ 0.16
USF1-209ENST00000529476 MAMDC4Q6UXC1 1216 aa16.07■□□□□ 0.16
USF1-209ENST00000529476 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
USF1-209ENST00000529476 DNERQ8NFT8 737 aa16.07■□□□□ 0.16
USF1-209ENST00000529476 TINF2Q9BSI4 451 aa16.07■□□□□ 0.16
USF1-209ENST00000529476 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
USF1-209ENST00000529476 BIN2Q9UBW5 565 aaPredicted RBP16.07■□□□□ 0.16
USF1-209ENST00000529476 ASB14A6NK59 587 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 INHAP05111 366 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 XBP1P17861 261 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 EIF2AK2P19525 551 aaKnown RBP16.06■□□□□ 0.16
USF1-209ENST00000529476 GJB2P29033 226 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 GNA11P29992 359 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 UBXN2AP68543 259 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 NPY5RQ15761 445 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 ARHGEF16Q5VV41 709 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 JAKMIP3Q5VZ66 844 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 MFSD14CQ5VZR4 134 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 ARMCX2Q7L311 632 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 NSUN6Q8TEA1 469 aaKnown RBP16.06■□□□□ 0.16
USF1-209ENST00000529476 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 SMC3Q9UQE7 1217 aa16.06■□□□□ 0.16
USF1-209ENST00000529476 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.06■□□□□ 0.16
USF1-209ENST00000529476 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
USF1-209ENST00000529476 SNAI1O95863 264 aaPredicted RBP16.05■□□□□ 0.16
USF1-209ENST00000529476 CLK2P49760 499 aaKnown RBP16.05■□□□□ 0.16
USF1-209ENST00000529476 CACNB2Q08289 660 aaPredicted RBP16.05■□□□□ 0.16
USF1-209ENST00000529476 PRAMEF19Q5SWL8 479 aa16.05■□□□□ 0.16
USF1-209ENST00000529476 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
USF1-209ENST00000529476 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
USF1-209ENST00000529476 IL31RAQ8NI17 732 aa16.05■□□□□ 0.16
USF1-209ENST00000529476 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
USF1-209ENST00000529476 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.05■□□□□ 0.16
USF1-209ENST00000529476 PCDHA6Q9UN73 950 aa16.05■□□□□ 0.16
USF1-209ENST00000529476 PCDHA4Q9UN74 947 aa16.05■□□□□ 0.16
USF1-209ENST00000529476 PCDHA8Q9Y5H6 950 aa16.05■□□□□ 0.16
USF1-209ENST00000529476 FRMPD4Q14CM0 1322 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
USF1-209ENST00000529476 EDNRBP24530 442 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 GUCY1B3Q02153 619 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 TRIM29Q14134 588 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 KRT40Q6A162 431 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 TEX2Q8IWB9 1127 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 BLIDQ8IZY5 108 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 REXO1Q8N1G1 1221 aaKnown RBP16.04■□□□□ 0.16
USF1-209ENST00000529476 DAGLBQ8NCG7 672 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 TRPV1Q8NER1 839 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 BICD2Q8TD16 824 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 MORC4Q8TE76 937 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 C8orf76Q96K31 380 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 PDCD2LQ9BRP1 358 aa16.04■□□□□ 0.16
USF1-209ENST00000529476 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 NR3C2P08235 984 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 PDE4DQ08499 809 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 AP3B2Q13367 1082 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 PGM5Q15124 567 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
USF1-209ENST00000529476 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 GALNT17Q6IS24 598 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 EEPD1Q7L9B9 569 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 OXER1Q8TDS5 423 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
USF1-209ENST00000529476 ZFP91Q96JP5 570 aaPredicted RBP16.03■□□□□ 0.16
USF1-209ENST00000529476 IWS1Q96ST2 819 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 MPHOSPH6Q99547 160 aaKnown RBP16.03■□□□□ 0.16
USF1-209ENST00000529476 ANO3Q9BYT9 981 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 PRO3102Q9H379 93 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 CNPY2Q9Y2B0 182 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 MYH7BA7E2Y1 1941 aa16.03■□□□□ 0.16
USF1-209ENST00000529476 KIAA1217Q5T5P2 1943 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 B4DLN1 442 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 M0R2N6 131 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 FOSP01100 380 aaPredicted RBP16.02■□□□□ 0.16
USF1-209ENST00000529476 MMP1P03956 469 aa16.02■□□□□ 0.16
USF1-209ENST00000529476 MYCLP12524 364 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms