RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 CREB3L3Q68CJ9 461 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 CASC1Q6TDU7 716 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
COPB1-206ENST00000529210 CATIPQ7Z7H3 387 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 FAM126BQ8IXS8 530 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 BADQ92934 168 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 LRCH3Q96II8 777 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 SPZ1Q9BXG8 430 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 VAT1LQ9HCJ6 419 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 PRDM5Q9NQX1 630 aaPredicted RBP14.01□□□□□ -0.17
COPB1-206ENST00000529210 COL20A1Q9P218 1284 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 SCN10AQ9Y5Y9 1956 aa14.01□□□□□ -0.17
COPB1-206ENST00000529210 GRIN2DO15399 1336 aa14□□□□□ -0.17
COPB1-206ENST00000529210 PNMA6FA0A0J9YX94 578 aa14□□□□□ -0.17
COPB1-206ENST00000529210 SH2B2O14492 632 aaPredicted RBP14□□□□□ -0.17
COPB1-206ENST00000529210 PRC1O43663 620 aa14□□□□□ -0.17
COPB1-206ENST00000529210 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
COPB1-206ENST00000529210 CPT1AP50416 773 aa14□□□□□ -0.17
COPB1-206ENST00000529210 TTLL4Q14679 1199 aa14□□□□□ -0.17
COPB1-206ENST00000529210 PPP2R5BQ15173 497 aa14□□□□□ -0.17
COPB1-206ENST00000529210 STXBP2Q15833 593 aa14□□□□□ -0.17
COPB1-206ENST00000529210 CCDC62Q6P9F0 684 aa14□□□□□ -0.17
COPB1-206ENST00000529210 CXCL17Q6UXB2 119 aa14□□□□□ -0.17
COPB1-206ENST00000529210 CHST3Q7LGC8 479 aa14□□□□□ -0.17
COPB1-206ENST00000529210 ZNF654Q8IZM8 581 aa14□□□□□ -0.17
COPB1-206ENST00000529210 TAAR1Q96RJ0 339 aa14□□□□□ -0.17
COPB1-206ENST00000529210 RMDN3Q96TC7 470 aa14□□□□□ -0.17
COPB1-206ENST00000529210 LZTS2Q9BRK4 669 aa14□□□□□ -0.17
COPB1-206ENST00000529210 ANO2Q9NQ90 1003 aa14□□□□□ -0.17
COPB1-206ENST00000529210 TMEM39AQ9NV64 488 aa14□□□□□ -0.17
COPB1-206ENST00000529210 POLR3EQ9NVU0 708 aa14□□□□□ -0.17
COPB1-206ENST00000529210 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
COPB1-206ENST00000529210 BAZ2BQ9UIF8 2168 aaKnown RBP14□□□□□ -0.17
COPB1-206ENST00000529210 A6NJR5 290 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 TLR3O15455 904 aaKnown RBP13.99□□□□□ -0.17
COPB1-206ENST00000529210 TIMP1P01033 207 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 RAG1P15918 1043 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 KIF5BP33176 963 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 ITGA7Q13683 1181 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 RNF20Q5VTR2 975 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 PIGSQ96S52 555 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 PXMP2Q9NR77 195 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
COPB1-206ENST00000529210 FRMPD4Q14CM0 1322 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 KPNA6O60684 536 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 CDC45O75419 566 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 EIF3JO75822 258 aaKnown RBP13.98□□□□□ -0.17
COPB1-206ENST00000529210 ARIH2O95376 493 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 CFBP00751 764 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 CALM1P0DP23 149 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 CALM2P0DP24 149 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 CALM3P0DP25 149 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 PTGS1P23219 599 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 GNAQP50148 359 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 PURAQ00577 322 aaKnown RBP13.98□□□□□ -0.17
COPB1-206ENST00000529210 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
COPB1-206ENST00000529210 FAM109BQ6ICB4 259 aaPredicted RBP13.98□□□□□ -0.17
COPB1-206ENST00000529210 MFSD5Q6N075 450 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 SKAP1Q86WV1 359 aa13.98□□□□□ -0.17
COPB1-206ENST00000529210 CTCFLQ8NI51 663 aaPredicted RBP13.98□□□□□ -0.17
COPB1-206ENST00000529210 EMID1Q96A84 441 aaPredicted RBP13.98□□□□□ -0.17
COPB1-206ENST00000529210 NR3C2P08235 984 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 TXNP10599 105 aaKnown RBP13.97□□□□□ -0.17
COPB1-206ENST00000529210 FPGSQ05932 587 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 COL9A3Q14050 684 aaPredicted RBP13.97□□□□□ -0.17
COPB1-206ENST00000529210 SHHQ15465 462 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 ARHGEF16Q5VV41 709 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 VSIG10LQ86VR7 867 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 OR6J1Q8NGC5 347 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 KCNB2Q92953 911 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 VTI1AQ96AJ9 217 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 CCDC136Q96JN2 1154 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 PDCD2LQ9BRP1 358 aa13.97□□□□□ -0.17
COPB1-206ENST00000529210 GPHNQ9NQX3 736 aaPredicted RBP13.97□□□□□ -0.17
COPB1-206ENST00000529210 CCDC69A6NI79 296 aa13.96□□□□□ -0.17
COPB1-206ENST00000529210 GCOM1H8Y6P7 765 aaPredicted RBP13.96□□□□□ -0.17
COPB1-206ENST00000529210 POLR2MP0CAP2 368 aa13.96□□□□□ -0.17
COPB1-206ENST00000529210 EXOSC10Q01780 885 aaKnown RBP13.96□□□□□ -0.17
COPB1-206ENST00000529210 C9orf50Q5SZB4 431 aa13.96□□□□□ -0.17
COPB1-206ENST00000529210 KCNV1Q6PIU1 500 aa13.96□□□□□ -0.17
COPB1-206ENST00000529210 HOMER1Q86YM7 354 aa13.96□□□□□ -0.17
COPB1-206ENST00000529210 MTG1Q9BT17 334 aaPredicted RBP13.96□□□□□ -0.17
COPB1-206ENST00000529210 DDX41Q9UJV9 622 aaKnown RBP13.96□□□□□ -0.17
COPB1-206ENST00000529210 PIK3CDO00329 1044 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 EPB41L2O43491 1005 aaKnown RBP13.95□□□□□ -0.18
COPB1-206ENST00000529210 RGS20O76081 388 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 GH1P01241 217 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 TGFB3P10600 412 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 HOXD8P13378 290 aaPredicted RBP13.95□□□□□ -0.18
COPB1-206ENST00000529210 EIF2AK2P19525 551 aaKnown RBP13.95□□□□□ -0.18
COPB1-206ENST00000529210 EPHB4P54760 987 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 SMAD3P84022 425 aaKnown RBP13.95□□□□□ -0.18
COPB1-206ENST00000529210 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
COPB1-206ENST00000529210 ARHGAP1Q07960 439 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 PPIGQ13427 754 aaKnown RBP eCLIP13.95□□□□□ -0.183e-7■□□□□ 8.2
COPB1-206ENST00000529210 KRT32Q14532 448 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 PGM5Q15124 567 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 NFRKBQ6P4R8 1299 aa13.95□□□□□ -0.18
COPB1-206ENST00000529210 TEX2Q8IWB9 1127 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms