RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 SMIM22K7EJ46 135 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 LAD1O00515 517 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 GNA11P29992 359 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 GCLCP48506 637 aaPredicted RBP13.3□□□□□ -0.28
USF1-208ENST00000528768 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
USF1-208ENST00000528768 PNOCQ13519 176 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 GRIK5Q16478 980 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 ZNF697Q5TEC3 545 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 GADL1Q6ZQY3 521 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 TNFRSF25Q93038 417 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
USF1-208ENST00000528768 GUCD1Q96NT3 240 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 TMEM47Q9BQJ4 181 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 SPZ1Q9BXG8 430 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 SERTAD1Q9UHV2 236 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 AFG3L2Q9Y4W6 797 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 TTC28Q96AY4 2481 aa13.3□□□□□ -0.28
USF1-208ENST00000528768 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
USF1-208ENST00000528768 hCG_1642624A0A1W2PR95 340 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 PALM3A6NDB9 673 aaPredicted RBP13.29□□□□□ -0.28
USF1-208ENST00000528768 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 PTPRAP18433 802 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 LONP1P36776 959 aaKnown RBP13.29□□□□□ -0.28
USF1-208ENST00000528768 PLCD1P51178 756 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 RHBDL3P58872 404 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 ZNF174Q15697 407 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 NT5DC1Q5TFE4 455 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 PIK3AP1Q6ZUJ8 805 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 KRT25Q7Z3Z0 450 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 METTL16Q86W50 562 aaKnown RBP13.29□□□□□ -0.28
USF1-208ENST00000528768 TRMT44Q8IYL2 757 aaKnown RBP13.29□□□□□ -0.28
USF1-208ENST00000528768 IQUBQ8NA54 791 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
USF1-208ENST00000528768 C6orf50Q9HD87 102 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 MAD2L2Q9UI95 211 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 AGTPBP1Q9UPW5 1226 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 DAGLAQ9Y4D2 1042 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 PCDHA5Q9Y5H7 936 aa13.29□□□□□ -0.28
USF1-208ENST00000528768 KLRF2D3W0D1 207 aa13.28□□□□□ -0.28
USF1-208ENST00000528768 SERPINC1P01008 464 aa13.28□□□□□ -0.28
USF1-208ENST00000528768 ERCC5P28715 1186 aaPredicted RBP13.28□□□□□ -0.28
USF1-208ENST00000528768 PTGDRQ13258 359 aa13.28□□□□□ -0.28
USF1-208ENST00000528768 PABPC4Q13310 644 aaKnown RBP eCLIP13.28□□□□□ -0.28
USF1-208ENST00000528768 ORC2Q13416 577 aaPredicted RBP13.28□□□□□ -0.28
USF1-208ENST00000528768 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
USF1-208ENST00000528768 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
USF1-208ENST00000528768 DDX60LQ5H9U9 1706 aaKnown RBP13.27□□□□□ -0.28
USF1-208ENST00000528768 PHF20L1A8MW92 1017 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 CCP110O43303 1012 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
USF1-208ENST00000528768 FANCCQ00597 558 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 MDM2Q00987 491 aaPredicted RBP13.27□□□□□ -0.29
USF1-208ENST00000528768 TCP10Q12799 353 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 ASPRV1Q53RT3 343 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 HEATR3Q7Z4Q2 680 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 LRRC8AQ8IWT6 810 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 ANKRD13CQ8N6S4 541 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 PROCA1Q8NCQ7 364 aaPredicted RBP13.27□□□□□ -0.29
USF1-208ENST00000528768 DHX58Q96C10 678 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 GSDMAQ96QA5 445 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 LBHD1Q9BQE6 289 aaPredicted RBP13.27□□□□□ -0.29
USF1-208ENST00000528768 GTPBP4Q9BZE4 634 aaKnown RBP13.27□□□□□ -0.29
USF1-208ENST00000528768 OSBPL5Q9H0X9 879 aaPredicted RBP13.27□□□□□ -0.29
USF1-208ENST00000528768 KCNF1Q9H3M0 494 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 RMND1Q9NWS8 449 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 IFNKQ9P0W0 207 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 MAN1B1Q9UKM7 699 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 PLIN4Q96Q06 1357 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 VCANP13611 3396 aa13.27□□□□□ -0.29
USF1-208ENST00000528768 VWA3AA6NCI4 1184 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 ACTN4O43707 911 aaKnown RBP13.26□□□□□ -0.29
USF1-208ENST00000528768 ENTPD3O75355 529 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 COL6A1P12109 1028 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 CDK11BP21127 795 aaKnown RBP13.26□□□□□ -0.29
USF1-208ENST00000528768 SARSP49591 514 aaKnown RBP13.26□□□□□ -0.29
USF1-208ENST00000528768 NAPAP54920 295 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 UBASH3AP57075 661 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 MORC3Q14149 939 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 SPECC1Q5M775 1068 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 CDC42EP5Q6NZY7 148 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 DTHD1Q6ZMT9 781 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 FILIP1Q7Z7B0 1213 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 PDILTQ8N807 584 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 SLC44A5Q8NCS7 719 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 MAFAQ8NHW3 353 aaPredicted RBP13.26□□□□□ -0.29
USF1-208ENST00000528768 ENOX1Q8TC92 643 aaKnown RBP13.26□□□□□ -0.29
USF1-208ENST00000528768 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 PYCARDQ9ULZ3 195 aa13.26□□□□□ -0.29
USF1-208ENST00000528768 PFASO15067 1338 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 KIF2AO00139 706 aaPredicted RBP13.25□□□□□ -0.29
USF1-208ENST00000528768 TUBB4AP04350 444 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 XRCC5P13010 732 aaKnown RBP13.25□□□□□ -0.29
USF1-208ENST00000528768 SFPQP23246 707 aaKnown RBP eCLIP13.25□□□□□ -0.29
USF1-208ENST00000528768 MCM7P33993 719 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 PRPHP41219 470 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 NOVP48745 357 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms