RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 LY75O60449 1722 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 PSMD14O00487 310 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 MAP2K7O14733 419 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 HOXA10P31260 410 aaPredicted RBP11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 TMEM266Q2M3C6 531 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 LARP4BQ92615 738 aaKnown RBP11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 NUDT12Q9BQG2 462 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 ABCB6Q9NP58 842 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 MYH1P12882 1939 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 IGKV6D-41A0A0C4DH26 115 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 PVALEFA0A1B0GWK0 134 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 POTEMA6NI47 508 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 PDIA5Q14554 519 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 FKBP15Q5T1M5 1219 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 ZNF662Q6ZS27 426 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 UNC13DQ70J99 1090 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 TRAPPC11Q7Z392 1133 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 NOA1Q8NC60 698 aaKnown RBP11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 JAKMIP2Q96AA8 810 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 CRAMP1Q96RY5 1269 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 JMJD4Q9H9V9 463 aa11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 DDX4Q9NQI0 724 aaKnown RBP11.72□□□□□ -0.53
AP002008.3-201ENST00000528614 EIF3CLB5ME19 914 aaKnown RBP11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 UBAP1LF5GYI3 381 aa11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 UBE2SQ16763 222 aa11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 CCDC170Q8IYT3 715 aa11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 ADGRF4Q8IZF3 695 aa11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 EIF3CQ99613 913 aaKnown RBP11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
AP002008.3-201ENST00000528614 PLIN4Q96Q06 1357 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 THSD7AQ9UPZ6 1657 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 PNMA6FA0A0J9YX94 578 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 ERICH4A6NGS2 130 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 KRT86O43790 486 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 ERLIN1O75477 346 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 TTLL1O95922 423 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 CYP2C19P33261 490 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 TNNI2P48788 182 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 VSNL1P62760 191 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 DDR1Q08345 913 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 VWA3BQ502W6 1294 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 SNX29Q8TEQ0 813 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 RAD54LQ92698 747 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 GJD4Q96KN9 370 aaPredicted RBP11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 RAB34Q9BZG1 259 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 RIC8AQ9NPQ8 531 aa11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.71□□□□□ -0.54
AP002008.3-201ENST00000528614 A0A1W2PQJ5 194 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 PPP1R11O60927 126 aaPredicted RBP11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 SRGAP2O75044 1071 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 IDEP14735 1019 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 CYP27A1Q02318 531 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 FIGNQ5HY92 759 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 KRT79Q5XKE5 535 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 HDXQ7Z353 690 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 KCNK18Q7Z418 384 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 SUGCTQ9HAC7 445 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 SAR1BQ9Y6B6 198 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 DUSP10Q9Y6W6 482 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 IPO7O95373 1038 aaKnown RBP11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 SLC16A2P36021 539 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 ECM1Q16610 540 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 PAPD7Q5XG87 772 aaKnown RBP11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 GUF1Q8N442 669 aaKnown RBP11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 CERS5Q8N5B7 392 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 DDX12PQ92771 950 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 NDST4Q9H3R1 872 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 SERPINB13Q9UIV8 391 aa11.7□□□□□ -0.54
AP002008.3-201ENST00000528614 H3BQF6 201 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 PPEF1O14829 653 aaPredicted RBP11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 CDK17Q00537 523 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 LRRC41Q15345 812 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 GJA10Q969M2 543 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 CCDC42Q96M95 316 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 MMS19Q96T76 1030 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 COA1Q9GZY4 146 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 SIK3Q9Y2K2 1263 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 FGFR1OPO95684 399 aaKnown RBP11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 PLEKP08567 350 aaPredicted RBP11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 SHMT1P34896 483 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 CLK2P49760 499 aaKnown RBP11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 SCNN1DP51172 638 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 TMEM119Q4V9L6 283 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
AP002008.3-201ENST00000528614 GLIS3Q8NEA6 775 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms