RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 SEC24BO95487 1268 aa19.45■□□□□ 0.7
HIF3A-211ENST00000528563 POLR2MP0CAP2 368 aa19.45■□□□□ 0.7
HIF3A-211ENST00000528563 CST5P28325 142 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-211ENST00000528563 HOXA13P31271 388 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-211ENST00000528563 IRX5P78411 483 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-211ENST00000528563 LRRC26Q2I0M4 334 aa19.45■□□□□ 0.7
HIF3A-211ENST00000528563 Q9Y3F1 56 aa19.45■□□□□ 0.7
HIF3A-211ENST00000528563 MYADML2A6NDP7 307 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 GOLGA8AA7E2F4 631 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 GOLGA8BA8MQT2 603 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 NR3C2P08235 984 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 ADD1P35611 737 aaKnown RBP19.44■□□□□ 0.7
HIF3A-211ENST00000528563 TOB2Q14106 344 aaPredicted RBP19.44■□□□□ 0.7
HIF3A-211ENST00000528563 KCNA10Q16322 511 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 DUSP28Q4G0W2 176 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 ARHGEF16Q5VV41 709 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 NOL8Q76FK4 1167 aaKnown RBP19.44■□□□□ 0.7
HIF3A-211ENST00000528563 FERMT2Q96AC1 680 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 WDR11Q9BZH6 1224 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 SPC25Q9HBM1 224 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 PXMP2Q9NR77 195 aa19.44■□□□□ 0.7
HIF3A-211ENST00000528563 V9GY48 417 aaPredicted RBP19.44■□□□□ 0.7
HIF3A-211ENST00000528563 C6orf222P0C671 652 aaPredicted RBP19.43■□□□□ 0.7
HIF3A-211ENST00000528563 ACLYP53396 1101 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 ANAPC15P60006 121 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 STXBP2Q15833 593 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 GNASQ5JWF2 1037 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 SLC39A5Q6ZMH5 540 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 IL17RAQ96F46 866 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 UPF3BQ9BZI7 483 aaKnown RBP19.43■□□□□ 0.7
HIF3A-211ENST00000528563 NAP1L2Q9ULW6 460 aaPredicted RBP19.43■□□□□ 0.7
HIF3A-211ENST00000528563 ALPK3Q96L96 1907 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 CNTNAP5Q8WYK1 1306 aa19.43■□□□□ 0.7
HIF3A-211ENST00000528563 CCDC196A0A1B0GTZ2 297 aa19.42■□□□□ 0.7
HIF3A-211ENST00000528563 DYNC1LI2O43237 492 aaPredicted RBP19.42■□□□□ 0.7
HIF3A-211ENST00000528563 EIF3JO75822 258 aaKnown RBP19.42■□□□□ 0.7
HIF3A-211ENST00000528563 EIF2AK2P19525 551 aaKnown RBP19.42■□□□□ 0.7
HIF3A-211ENST00000528563 PTGS1P23219 599 aa19.42■□□□□ 0.7
HIF3A-211ENST00000528563 PDIA3P30101 505 aaKnown RBP19.42■□□□□ 0.7
HIF3A-211ENST00000528563 METAP2P50579 478 aaKnown RBP eCLIP19.42■□□□□ 0.7
HIF3A-211ENST00000528563 VSIG10LQ86VR7 867 aa19.42■□□□□ 0.7
HIF3A-211ENST00000528563 SCFD2Q8WU76 684 aa19.42■□□□□ 0.7
HIF3A-211ENST00000528563 PDCD2LQ9BRP1 358 aa19.42■□□□□ 0.7
HIF3A-211ENST00000528563 LRRC37A2A6NM11 1700 aa19.42■□□□□ 0.7
HIF3A-211ENST00000528563 PIK3CDO00329 1044 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 MEIS2O14770 477 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 ATN1P54259 1190 aaPredicted RBP19.41■□□□□ 0.7
HIF3A-211ENST00000528563 C1orf53Q5VUE5 145 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 CCDC62Q6P9F0 684 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 TLK2Q86UE8 772 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 FCHSD1Q86WN1 690 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 PCSK9Q8NBP7 692 aaKnown RBP19.41■□□□□ 0.7
HIF3A-211ENST00000528563 AP5M1Q9H0R1 490 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 NID2Q14112 1375 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 MOXD2PA6NHM9 499 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 SNX17Q15036 470 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 USP17L6PQ6QN14 398 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 PSTPIP2Q9H939 334 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 PDRG1Q9NUG6 133 aa19.41■□□□□ 0.7
HIF3A-211ENST00000528563 A0A1W2PQ45 241 aaPredicted RBP19.4■□□□□ 0.7
HIF3A-211ENST00000528563 A0A1W2PQY0 241 aa19.4■□□□□ 0.7
HIF3A-211ENST00000528563 ASGR1P07306 291 aa19.4■□□□□ 0.7
HIF3A-211ENST00000528563 BEX3Q00994 111 aa19.4■□□□□ 0.7
HIF3A-211ENST00000528563 PGM5Q15124 567 aa19.4■□□□□ 0.7
HIF3A-211ENST00000528563 NTRK3Q16288 839 aa19.4■□□□□ 0.7
HIF3A-211ENST00000528563 FSCN1Q16658 493 aaKnown RBP19.4■□□□□ 0.7
HIF3A-211ENST00000528563 DNAH12Q6ZR08 3092 aa19.4■□□□□ 0.7
HIF3A-211ENST00000528563 C7orf61Q8IZ16 206 aa19.4■□□□□ 0.7
HIF3A-211ENST00000528563 GPKOWQ92917 476 aaPredicted RBP eCLIP19.4■□□□□ 0.7
HIF3A-211ENST00000528563 ZNF274Q96GC6 653 aaPredicted RBP19.4■□□□□ 0.7
HIF3A-211ENST00000528563 ALDH8A1Q9H2A2 487 aaPredicted RBP19.4■□□□□ 0.7
HIF3A-211ENST00000528563 NKRFO15226 690 aaKnown RBP eCLIP19.39■□□□□ 0.69
HIF3A-211ENST00000528563 RGS20O76081 388 aa19.39■□□□□ 0.69
HIF3A-211ENST00000528563 TXNP10599 105 aaKnown RBP19.39■□□□□ 0.69
HIF3A-211ENST00000528563 C8orf34Q49A92 452 aa19.39■□□□□ 0.69
HIF3A-211ENST00000528563 WWC2Q6AWC2 1192 aa19.39■□□□□ 0.69
HIF3A-211ENST00000528563 SEPT14Q6ZU15 432 aa19.39■□□□□ 0.69
HIF3A-211ENST00000528563 HEATR3Q7Z4Q2 680 aa19.39■□□□□ 0.69
HIF3A-211ENST00000528563 IL31RAQ8NI17 732 aa19.39■□□□□ 0.69
HIF3A-211ENST00000528563 ELP1O95163 1332 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 FRMPD4Q14CM0 1322 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 ARIH2O95376 493 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 RTP1P59025 263 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 TTLL4Q14679 1199 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 TYW1BQ6NUM6 668 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 SMARCC2Q8TAQ2 1214 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 CUL5Q93034 780 aa19.38■□□□□ 0.69
HIF3A-211ENST00000528563 LARP6Q9BRS8 491 aaKnown RBP19.38■□□□□ 0.69
HIF3A-211ENST00000528563 PRPF3O43395 683 aaKnown RBP19.37■□□□□ 0.69
HIF3A-211ENST00000528563 MYCLP12524 364 aaPredicted RBP19.37■□□□□ 0.69
HIF3A-211ENST00000528563 CCT2P78371 535 aaKnown RBP19.37■□□□□ 0.69
HIF3A-211ENST00000528563 COPS5Q92905 334 aa19.37■□□□□ 0.69
HIF3A-211ENST00000528563 GLT1D1Q96MS3 346 aa19.37■□□□□ 0.69
HIF3A-211ENST00000528563 NCOA5Q9HCD5 579 aaKnown RBP19.37■□□□□ 0.69
HIF3A-211ENST00000528563 BARHL2Q9NY43 387 aa19.37■□□□□ 0.69
HIF3A-211ENST00000528563 hCG_1984214I3L0E3 225 aa19.36■□□□□ 0.69
HIF3A-211ENST00000528563 IFNAR1P17181 557 aa19.36■□□□□ 0.69
HIF3A-211ENST00000528563 CCND2P30279 289 aa19.36■□□□□ 0.69
HIF3A-211ENST00000528563 PKN1Q16512 942 aa19.36■□□□□ 0.69
HIF3A-211ENST00000528563 PFKFB3Q16875 520 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms