RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 CXXC1Q9P0U4 656 aaPredicted RBP30.22■■■□□ 2.43
TRIM3-206ENST00000528227 PARP1P09874 1014 aaKnown RBP30.21■■■□□ 2.43
TRIM3-206ENST00000528227 TXNP10599 105 aaKnown RBP30.21■■■□□ 2.43
TRIM3-206ENST00000528227 QRICH1Q2TAL8 776 aa30.21■■■□□ 2.43
TRIM3-206ENST00000528227 BRDTQ58F21 947 aaPredicted RBP30.21■■■□□ 2.43
TRIM3-206ENST00000528227 UBAC1Q9BSL1 405 aa30.21■■■□□ 2.43
TRIM3-206ENST00000528227 SCN10AQ9Y5Y9 1956 aa30.21■■■□□ 2.43
TRIM3-206ENST00000528227 A6NJR5 290 aa30.2■■■□□ 2.43
TRIM3-206ENST00000528227 SUPT20HL2P0C7V6 817 aa30.2■■■□□ 2.43
TRIM3-206ENST00000528227 PDE4AP27815 886 aa30.2■■■□□ 2.43
TRIM3-206ENST00000528227 TTLL4Q14679 1199 aa30.2■■■□□ 2.43
TRIM3-206ENST00000528227 SYTL5Q8TDW5 730 aaPredicted RBP30.2■■■□□ 2.43
TRIM3-206ENST00000528227 MTIF3Q9H2K0 278 aaKnown RBP30.2■■■□□ 2.43
TRIM3-206ENST00000528227 COL20A1Q9P218 1284 aa30.2■■■□□ 2.43
TRIM3-206ENST00000528227 ARIH2O95376 493 aa30.19■■■□□ 2.42
TRIM3-206ENST00000528227 GSPT1P15170 499 aaKnown RBP30.19■■■□□ 2.42
TRIM3-206ENST00000528227 OTOP2Q7RTS6 562 aa30.19■■■□□ 2.42
TRIM3-206ENST00000528227 TAAR1Q96RJ0 339 aa30.19■■■□□ 2.42
TRIM3-206ENST00000528227 JMJD4Q9H9V9 463 aa30.19■■■□□ 2.42
TRIM3-206ENST00000528227 MYH6P13533 1939 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 DHX16O60231 1041 aaKnown RBP30.18■■■□□ 2.42
TRIM3-206ENST00000528227 KPNA6O60684 536 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 CYP2C9P11712 490 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 NBPF20Q3BBV1 942 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 IFIT1BQ5T764 474 aaKnown RBP30.18■■■□□ 2.42
TRIM3-206ENST00000528227 TTC22Q5TAA0 569 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 FBXO11Q86XK2 927 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 MCF2L2Q86YR7 1114 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 RPUSD2Q8IZ73 545 aaKnown RBP30.18■■■□□ 2.42
TRIM3-206ENST00000528227 VWCEQ96DN2 955 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 SCLYQ96I15 445 aa30.18■■■□□ 2.42
TRIM3-206ENST00000528227 CCDC62Q6P9F0 684 aa30.17■■■□□ 2.42
TRIM3-206ENST00000528227 NSUN6Q8TEA1 469 aaKnown RBP30.17■■■□□ 2.42
TRIM3-206ENST00000528227 VAT1LQ9HCJ6 419 aa30.17■■■□□ 2.42
TRIM3-206ENST00000528227 MRPL11Q9Y3B7 192 aaKnown RBP30.17■■■□□ 2.42
TRIM3-206ENST00000528227 SEC23AQ15436 765 aa30.16■■■□□ 2.42
TRIM3-206ENST00000528227 RAB30Q15771 203 aa30.16■■■□□ 2.42
TRIM3-206ENST00000528227 FAM47CQ5HY64 1035 aa30.16■■■□□ 2.42
TRIM3-206ENST00000528227 NFRKBQ6P4R8 1299 aa30.16■■■□□ 2.42
TRIM3-206ENST00000528227 STAG2Q8N3U4 1231 aa30.16■■■□□ 2.42
TRIM3-206ENST00000528227 SUPT16HQ9Y5B9 1047 aaKnown RBP30.16■■■□□ 2.42
TRIM3-206ENST00000528227 GBF1Q92538 1859 aa30.16■■■□□ 2.42
TRIM3-206ENST00000528227 CYB5R4Q7L1T6 521 aa30.15■■■□□ 2.42
TRIM3-206ENST00000528227 IWS1Q96ST2 819 aa30.15■■■□□ 2.42
TRIM3-206ENST00000528227 RMDN3Q96TC7 470 aa30.15■■■□□ 2.42
TRIM3-206ENST00000528227 MSRAQ9UJ68 235 aa30.15■■■□□ 2.42
TRIM3-206ENST00000528227 SEPT14Q6ZU15 432 aa30.14■■■□□ 2.42
TRIM3-206ENST00000528227 PPP1R13LQ8WUF5 828 aa30.14■■■□□ 2.42
TRIM3-206ENST00000528227 KIAA1217Q5T5P2 1943 aa30.14■■■□□ 2.41
TRIM3-206ENST00000528227 PTPN11Q06124 597 aaPredicted RBP30.13■■■□□ 2.41
TRIM3-206ENST00000528227 STXBP2Q15833 593 aa30.13■■■□□ 2.41
TRIM3-206ENST00000528227 AMNQ9BXJ7 453 aa30.13■■■□□ 2.41
TRIM3-206ENST00000528227 PFKMP08237 780 aa30.12■■■□□ 2.41
TRIM3-206ENST00000528227 ARHGAP1Q07960 439 aa30.12■■■□□ 2.41
TRIM3-206ENST00000528227 LY6KQ17RY6 165 aa30.12■■■□□ 2.41
TRIM3-206ENST00000528227 MTMR8Q96EF0 704 aa30.12■■■□□ 2.41
TRIM3-206ENST00000528227 MAD2L2Q9UI95 211 aa30.12■■■□□ 2.41
TRIM3-206ENST00000528227 YBX2Q9Y2T7 364 aaKnown RBP30.12■■■□□ 2.41
TRIM3-206ENST00000528227 SLC4A7Q9Y6M7 1214 aa30.12■■■□□ 2.41
TRIM3-206ENST00000528227 PRUNE2Q8WUY3 3088 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 CUL9Q8IWT3 2517 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 KLRF2D3W0D1 207 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 OPLAHO14841 1288 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 GH1P01241 217 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 MMP3P08254 477 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 ARHGEF16Q5VV41 709 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 USP38Q8NB14 1042 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 AFG1LQ8WV93 481 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 GAS2L1Q99501 681 aaPredicted RBP30.11■■■□□ 2.41
TRIM3-206ENST00000528227 NKX2-4Q9H2Z4 354 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 PRDM12Q9H4Q4 367 aa30.11■■■□□ 2.41
TRIM3-206ENST00000528227 SCN5AQ14524 2016 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 CFBP00751 764 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 CYP21A2P08686 494 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 EIF2AK2P19525 551 aaKnown RBP30.1■■■□□ 2.41
TRIM3-206ENST00000528227 HSD17B4P51659 736 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 GHRHRQ02643 423 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 TRDNQ13061 729 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 RUFY2Q8WXA3 655 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 PXMP2Q9NR77 195 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 TANC1Q9C0D5 1861 aa30.1■■■□□ 2.41
TRIM3-206ENST00000528227 PALM3A6NDB9 673 aaPredicted RBP30.09■■■□□ 2.41
TRIM3-206ENST00000528227 PITPNM1O00562 1244 aa30.09■■■□□ 2.41
TRIM3-206ENST00000528227 PPP1R11O60927 126 aaPredicted RBP30.09■■■□□ 2.41
TRIM3-206ENST00000528227 CHMLP26374 656 aa30.09■■■□□ 2.41
TRIM3-206ENST00000528227 PTH1RQ03431 593 aa30.09■■■□□ 2.41
TRIM3-206ENST00000528227 DEFB128Q7Z7B8 93 aa30.09■■■□□ 2.41
TRIM3-206ENST00000528227 U3KPZ7 1027 aaPredicted RBP30.09■■■□□ 2.41
TRIM3-206ENST00000528227 ZBBXA8MT70 800 aa30.08■■■□□ 2.41
TRIM3-206ENST00000528227 ZBTB5O15062 677 aa30.08■■■□□ 2.41
TRIM3-206ENST00000528227 EIF3JO75822 258 aaKnown RBP30.08■■■□□ 2.41
TRIM3-206ENST00000528227 NR3C2P08235 984 aa30.08■■■□□ 2.41
TRIM3-206ENST00000528227 RFC2P35250 354 aa30.08■■■□□ 2.41
TRIM3-206ENST00000528227 RABGGTBP53611 331 aa30.08■■■□□ 2.41
TRIM3-206ENST00000528227 SLC28A3Q9HAS3 691 aa30.08■■■□□ 2.41
TRIM3-206ENST00000528227 DDX41Q9UJV9 622 aaKnown RBP30.08■■■□□ 2.41
TRIM3-206ENST00000528227 CHST3Q7LGC8 479 aa30.07■■■□□ 2.4
TRIM3-206ENST00000528227 KAT2BQ92831 832 aa30.07■■■□□ 2.4
TRIM3-206ENST00000528227 PCDHA1Q9Y5I3 950 aa30.07■■■□□ 2.4
TRIM3-206ENST00000528227 CHD9Q3L8U1 2897 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms