RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ERICH6BQ5W0A0 696 aa38.32■■■■□ 3.72
SSSCA1-205ENST00000527920 TDHQ8IZJ6 230 aa38.32■■■■□ 3.72
SSSCA1-205ENST00000527920 PRDM5Q9NQX1 630 aaPredicted RBP38.32■■■■□ 3.72
SSSCA1-205ENST00000527920 LAMA3Q16787 3333 aa38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 PQBP1O60828 265 aaKnown RBP38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 CFBP00751 764 aa38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 CDK7P50613 346 aa38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 KRT32Q14532 448 aa38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 TMEM63BQ5T3F8 832 aa38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 SGMS1Q86VZ5 419 aa38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 NEK1Q96PY6 1258 aa38.31■■■■□ 3.72
SSSCA1-205ENST00000527920 DCDC2CA8MYV0 355 aa38.3■■■■□ 3.72
SSSCA1-205ENST00000527920 PPP2R5BQ15173 497 aa38.3■■■■□ 3.72
SSSCA1-205ENST00000527920 MYL10Q9BUA6 226 aa38.3■■■■□ 3.72
SSSCA1-205ENST00000527920 SEZ6LQ9BYH1 1024 aa38.3■■■■□ 3.72
SSSCA1-205ENST00000527920 TRIM43BA6NCK2 446 aa38.29■■■■□ 3.72
SSSCA1-205ENST00000527920 ARVCFO00192 962 aa38.29■■■■□ 3.72
SSSCA1-205ENST00000527920 KIAA0355O15063 1070 aa38.29■■■■□ 3.72
SSSCA1-205ENST00000527920 TRIM43Q96BQ3 446 aaPredicted RBP38.29■■■■□ 3.72
SSSCA1-205ENST00000527920 LTBP2Q14767 1821 aa38.28■■■■□ 3.72
SSSCA1-205ENST00000527920 PTGS1P23219 599 aa38.28■■■■□ 3.72
SSSCA1-205ENST00000527920 STXBP2Q15833 593 aa38.28■■■■□ 3.72
SSSCA1-205ENST00000527920 CXCL17Q6UXB2 119 aa38.28■■■■□ 3.72
SSSCA1-205ENST00000527920 SH3RF1Q7Z6J0 888 aa38.28■■■■□ 3.72
SSSCA1-205ENST00000527920 SLC12A7Q9Y666 1083 aa38.28■■■■□ 3.72
SSSCA1-205ENST00000527920 TTLL4Q14679 1199 aa38.27■■■■□ 3.72
SSSCA1-205ENST00000527920 ARHGEF16Q5VV41 709 aa38.27■■■■□ 3.72
SSSCA1-205ENST00000527920 RASEFQ8IZ41 740 aa38.27■■■■□ 3.72
SSSCA1-205ENST00000527920 SLC43A3Q8NBI5 491 aa38.27■■■■□ 3.72
SSSCA1-205ENST00000527920 VTI1AQ96AJ9 217 aa38.27■■■■□ 3.72
SSSCA1-205ENST00000527920 PXMP2Q9NR77 195 aa38.27■■■■□ 3.72
SSSCA1-205ENST00000527920 CPT1AP50416 773 aa38.26■■■■□ 3.72
SSSCA1-205ENST00000527920 FAAP100Q0VG06 881 aa38.26■■■■□ 3.72
SSSCA1-205ENST00000527920 LRIT3Q3SXY7 679 aa38.26■■■■□ 3.72
SSSCA1-205ENST00000527920 DHX32Q7L7V1 743 aaKnown RBP38.26■■■■□ 3.72
SSSCA1-205ENST00000527920 KCNB2Q92953 911 aa38.26■■■■□ 3.72
SSSCA1-205ENST00000527920 RRP36Q96EU6 259 aaKnown RBP38.26■■■■□ 3.72
SSSCA1-205ENST00000527920 PCDH10Q9P2E7 1040 aa38.26■■■■□ 3.72
SSSCA1-205ENST00000527920 BAZ2BQ9UIF8 2168 aaKnown RBP38.26■■■■□ 3.71
SSSCA1-205ENST00000527920 EXOSC10Q01780 885 aaKnown RBP38.25■■■■□ 3.71
SSSCA1-205ENST00000527920 GCOM1H8Y6P7 765 aaPredicted RBP38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 HMGB1P09429 215 aaKnown RBP38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 POLR2MP0CAP2 368 aa38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 TXNP10599 105 aaKnown RBP38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 CCDC62Q6P9F0 684 aa38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 OR6J1Q8NGC5 347 aa38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 LRRC2Q9BYS8 371 aa38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 TMEM39AQ9NV64 488 aa38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 POLR3EQ9NVU0 708 aa38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 PPP4R2Q9NY27 417 aa38.24■■■■□ 3.71
SSSCA1-205ENST00000527920 EIF3JO75822 258 aaKnown RBP38.23■■■■□ 3.71
SSSCA1-205ENST00000527920 NR3C2P08235 984 aa38.23■■■■□ 3.71
SSSCA1-205ENST00000527920 EIF2AK2P19525 551 aaKnown RBP38.23■■■■□ 3.71
SSSCA1-205ENST00000527920 BRDTQ58F21 947 aaPredicted RBP38.23■■■■□ 3.71
SSSCA1-205ENST00000527920 TBX21Q9UL17 535 aa38.23■■■■□ 3.71
SSSCA1-205ENST00000527920 ADCK5Q3MIX3 580 aa38.22■■■■□ 3.71
SSSCA1-205ENST00000527920 FAM126BQ8IXS8 530 aa38.22■■■■□ 3.71
SSSCA1-205ENST00000527920 BADQ92934 168 aa38.22■■■■□ 3.71
SSSCA1-205ENST00000527920 PDCD2LQ9BRP1 358 aa38.22■■■■□ 3.71
SSSCA1-205ENST00000527920 SEC63Q9UGP8 760 aaKnown RBP38.22■■■■□ 3.71
SSSCA1-205ENST00000527920 A6NJR5 290 aa38.21■■■■□ 3.71
SSSCA1-205ENST00000527920 REC8O95072 547 aa38.21■■■■□ 3.71
SSSCA1-205ENST00000527920 PLEKHA8P1O95397 391 aa38.21■■■■□ 3.71
SSSCA1-205ENST00000527920 SRBD1Q8N5C6 995 aaKnown RBP38.21■■■■□ 3.71
SSSCA1-205ENST00000527920 FANCBQ8NB91 859 aa38.21■■■■□ 3.71
SSSCA1-205ENST00000527920 ARIH2O95376 493 aa38.2■■■■□ 3.71
SSSCA1-205ENST00000527920 RAG1P15918 1043 aa38.2■■■■□ 3.71
SSSCA1-205ENST00000527920 HOXA13P31271 388 aaPredicted RBP38.2■■■■□ 3.71
SSSCA1-205ENST00000527920 HSPA4P34932 840 aa38.2■■■■□ 3.71
SSSCA1-205ENST00000527920 ITGA7Q13683 1181 aa38.2■■■■□ 3.71
SSSCA1-205ENST00000527920 APOA5Q6Q788 366 aa38.2■■■■□ 3.71
SSSCA1-205ENST00000527920 SYNE3Q6ZMZ3 975 aa38.2■■■■□ 3.71
SSSCA1-205ENST00000527920 TLR3O15455 904 aaKnown RBP38.19■■■■□ 3.7
SSSCA1-205ENST00000527920 EPB41L2O43491 1005 aaKnown RBP38.19■■■■□ 3.7
SSSCA1-205ENST00000527920 KPNA6O60684 536 aa38.19■■■■□ 3.7
SSSCA1-205ENST00000527920 ITGB8P26012 769 aa38.19■■■■□ 3.7
SSSCA1-205ENST00000527920 PURAQ00577 322 aaKnown RBP38.19■■■■□ 3.7
SSSCA1-205ENST00000527920 TMTC3Q6ZXV5 915 aa38.19■■■■□ 3.7
SSSCA1-205ENST00000527920 GRIN2DO15399 1336 aa38.18■■■■□ 3.7
SSSCA1-205ENST00000527920 SOX1O00570 391 aaPredicted RBP38.18■■■■□ 3.7
SSSCA1-205ENST00000527920 CD4P01730 458 aa38.18■■■■□ 3.7
SSSCA1-205ENST00000527920 RXRAP19793 462 aa38.18■■■■□ 3.7
SSSCA1-205ENST00000527920 SEPT14Q6ZU15 432 aa38.18■■■■□ 3.7
SSSCA1-205ENST00000527920 MICU3Q86XE3 530 aa38.18■■■■□ 3.7
SSSCA1-205ENST00000527920 PIBF1Q8WXW3 757 aa38.18■■■■□ 3.7
SSSCA1-205ENST00000527920 GPR153Q6NV75 609 aa38.17■■■■□ 3.7
SSSCA1-205ENST00000527920 VSIG10LQ86VR7 867 aa38.17■■■■□ 3.7
SSSCA1-205ENST00000527920 COPS5Q92905 334 aa38.17■■■■□ 3.7
SSSCA1-205ENST00000527920 FRMPD4Q14CM0 1322 aa38.16■■■■□ 3.7
SSSCA1-205ENST00000527920 SZT2Q5T011 3432 aa38.16■■■■□ 3.7
SSSCA1-205ENST00000527920 RCAN1P53805 252 aa38.16■■■■□ 3.7
SSSCA1-205ENST00000527920 PGM5Q15124 567 aa38.16■■■■□ 3.7
SSSCA1-205ENST00000527920 RBM28Q9NW13 759 aaKnown RBP38.16■■■■□ 3.7
SSSCA1-205ENST00000527920 TIMP1P01033 207 aa38.15■■■■□ 3.7
SSSCA1-205ENST00000527920 GH1P01241 217 aa38.15■■■■□ 3.7
SSSCA1-205ENST00000527920 CENPBP07199 599 aaPredicted RBP38.15■■■■□ 3.7
SSSCA1-205ENST00000527920 MTG1Q9BT17 334 aaPredicted RBP38.15■■■■□ 3.7
SSSCA1-205ENST00000527920 PIK3CDO00329 1044 aa38.14■■■■□ 3.7
SSSCA1-205ENST00000527920 EMID1Q96A84 441 aaPredicted RBP38.14■■■■□ 3.7
SSSCA1-205ENST00000527920 TCEANC2Q96MN5 208 aa38.14■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms