RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 GRIN2DO15399 1336 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 MROH7Q68CQ1 1323 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 MYL3P08590 195 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 OAZ1P54368 228 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 BAATQ14032 418 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-210ENST00000527699 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
CAPN1-210ENST00000527699 ANKRD45Q5TZF3 282 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 TAPT1Q6NXT6 567 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 ASCL5Q7RTU5 278 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 GMCL1Q96IK5 515 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.53
CAPN1-210ENST00000527699 CYP39A1Q9NYL5 469 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
CAPN1-210ENST00000527699 GNEQ9Y223 722 aaKnown RBP11.71□□□□□ -0.53
CAPN1-210ENST00000527699 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.71□□□□□ -0.53
CAPN1-210ENST00000527699 TTC41PQ6P2S7 1318 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 PTPDC1A2A3K4 754 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 ASB14A6NK59 587 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 B4GALT4O60513 344 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 CD4P01730 458 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 CYP2C9P11712 490 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 MX1P20591 662 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 CALML3P27482 149 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 HAND2P61296 217 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 LRRFIP1Q32MZ4 808 aaKnown RBP11.7□□□□□ -0.54
CAPN1-210ENST00000527699 DEFB128Q7Z7B8 93 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 IRF2BPLQ9H1B7 796 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 WNT8AQ9H1J5 351 aa11.7□□□□□ -0.54
CAPN1-210ENST00000527699 SUPT16HQ9Y5B9 1047 aaKnown RBP11.7□□□□□ -0.54
CAPN1-210ENST00000527699 TECTAO75443 2155 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 PLIN4Q96Q06 1357 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 GRXCR2A6NFK2 248 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 NFIBO00712 420 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 TKFCQ3LXA3 575 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 FAM47CQ5HY64 1035 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 SLC30A10Q6XR72 485 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 DGLUCYQ7Z3D6 616 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 COPS5Q92905 334 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 FAM227BQ96M60 508 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 TRMT13Q9NUP7 481 aaKnown RBP11.69□□□□□ -0.54
CAPN1-210ENST00000527699 MUTYHQ9UIF7 546 aa11.69□□□□□ -0.54
CAPN1-210ENST00000527699 NCOR2Q9Y618 2525 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 COL4A4P53420 1690 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-210ENST00000527699 COL4A6Q14031 1691 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 PLXNA3P51805 1871 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 H0Y858 1186 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 ZEB2O60315 1214 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 ALDH5A1P51649 535 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-210ENST00000527699 PKN1Q16512 942 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 SYDE2Q5VT97 1194 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 IQSEC1Q6DN90 963 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
CAPN1-210ENST00000527699 OR6J1Q8NGC5 347 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 ZKSCAN3Q9BRR0 538 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 NOC4LQ9BVI4 516 aaKnown RBP11.68□□□□□ -0.54
CAPN1-210ENST00000527699 CPVLQ9H3G5 476 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 TLR9Q9NR96 1032 aa11.68□□□□□ -0.54
CAPN1-210ENST00000527699 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-210ENST00000527699 A0A0D9SFI3 127 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 H3BQ06 376 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-210ENST00000527699 FDX1P10109 184 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 TTLL4Q14679 1199 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 PUS10Q3MIT2 529 aaKnown RBP11.67□□□□□ -0.54
CAPN1-210ENST00000527699 USH1GQ495M9 461 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 SLC43A3Q8NBI5 491 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 GDPD5Q8WTR4 605 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 RILPL2Q969X0 211 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 CRBNQ96SW2 442 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 TMEM47Q9BQJ4 181 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 WDR11Q9BZH6 1224 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 RANBP17Q9H2T7 1088 aaKnown RBP11.67□□□□□ -0.54
CAPN1-210ENST00000527699 FAM50BQ9Y247 325 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 ACACBO00763 2458 aa11.67□□□□□ -0.54
CAPN1-210ENST00000527699 TRIOO75962 3097 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-210ENST00000527699 PRR23AA6NEV1 266 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 TMEM221A6NGB7 291 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 M0R296 226 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 KDM4AO75164 1064 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 CABYRO75952 493 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 FGAP02671 866 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 ICAM1P05362 532 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 TAP1Q03518 808 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 ZP2Q05996 745 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 NMIQ13287 307 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-210ENST00000527699 ZNF589Q86UQ0 364 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-210ENST00000527699 DCAF4Q8WV16 495 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 UBA5Q9GZZ9 404 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 ALDH8A1Q9H2A2 487 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-210ENST00000527699 VTA1Q9NP79 307 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 GPHNQ9NQX3 736 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-210ENST00000527699 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
CAPN1-210ENST00000527699 KIF28PB7ZC32 967 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 SORBS3O60504 671 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 PLA2G6O60733 806 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms