RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 FBXO28Q9NVF7 368 aa18.23■□□□□ 0.51
SNRNP35-204ENST00000527158 HOXA13P31271 388 aaPredicted RBP18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 SREBF1P36956 1147 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 USP14P54578 494 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 AMPD3Q01432 767 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 SCYL3Q8IZE3 742 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 CRYGNQ8WXF5 182 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 PICK1Q9NRD5 415 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 FANCLQ9NW38 375 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 ZNF112Q9UJU3 913 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 PYCARDQ9ULZ3 195 aa18.22■□□□□ 0.51
SNRNP35-204ENST00000527158 ABCB11O95342 1321 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 GCOM1H8Y6P7 765 aaPredicted RBP18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 POLR2MP0CAP2 368 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 TAL1P17542 331 aaPredicted RBP18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 FANCCQ00597 558 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 SEMA3FQ13275 785 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 SLFN12Q8IYM2 578 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 MBOAT7Q96N66 472 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 WRNIP1Q96S55 665 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 SLF1Q9BQI6 1058 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 SYT17Q9BSW7 474 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 HSD3B7Q9H2F3 369 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 AS3MTQ9HBK9 375 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 IFNKQ9P0W0 207 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 CFBP00751 764 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 SERPINC1P01008 464 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 FMR1Q06787 632 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 PRAMEF18Q5VWM3 479 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 CCDC186Q7Z3E2 898 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 P2RX7Q99572 595 aaKnown RBP18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 NFE2L3Q9Y4A8 694 aa18.21■□□□□ 0.51
SNRNP35-204ENST00000527158 ATAD5Q96QE3 1844 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 POTEMA6NI47 508 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 CBFA2T2O43439 604 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 PTGS1P23219 599 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 HIRAP54198 1017 aaPredicted RBP18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 DHX8Q14562 1220 aaKnown RBP18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 SUPT20HL1Q3ZLR7 823 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 ZNF658Q5TYW1 1059 aaPredicted RBP18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 FCHSD1Q86WN1 690 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 LDHDQ86WU2 507 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 SNX29Q8TEQ0 813 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 XPO4Q9C0E2 1151 aaKnown RBP18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 RNF181Q9P0P0 153 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 STK17AQ9UEE5 414 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 ATP1A3P13637 1013 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 MTMR2Q13614 643 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 KCNB1Q14721 858 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 Q4G0T1 1027 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 KLHL10Q6JEL2 608 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 CCDC47Q96A33 483 aaKnown RBP18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 WDR18Q9BV38 432 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 TANGO6Q9C0B7 1094 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 EHMT1Q9H9B1 1298 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 KCNMB3Q9NPA1 279 aa18.2■□□□□ 0.5
SNRNP35-204ENST00000527158 MYH7BA7E2Y1 1941 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 PPP1R3GB7ZBB8 358 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 TBX3O15119 743 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 DDNO94850 711 aaPredicted RBP18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 ICAM1P05362 532 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 CDK11BP21127 795 aaKnown RBP18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 ZNF76P36508 570 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 SPP2Q13103 211 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 PRR16Q569H4 304 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 TRMT44Q8IYL2 757 aaKnown RBP18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 ZKSCAN4Q969J2 545 aaPredicted RBP18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 NRBP1Q9UHY1 535 aa18.19■□□□□ 0.5
SNRNP35-204ENST00000527158 CYP3A4P08684 503 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 CD44P16070 742 aaKnown RBP18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 CIITAP33076 1130 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 UBASH3AP57075 661 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 GRB10Q13322 594 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 SYCP1Q15431 976 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 SPATA1Q5VX52 437 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 SV2BQ7L1I2 683 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 SMYD4Q8IYR2 804 aaPredicted RBP18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 C7orf25Q9BPX7 421 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 CCDC94Q9BW85 323 aaPredicted RBP18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 CCPG1Q9ULG6 757 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 PTPRAP18433 802 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 BACE1P56817 501 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 ZNF280CQ8ND82 737 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 LRRC15Q8TF66 581 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 ADARB2Q9NS39 739 aaKnown RBP18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 EMILIN3Q9NT22 766 aa18.18■□□□□ 0.5
SNRNP35-204ENST00000527158 PITPNM2Q9BZ72 1349 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 SYNRGQ9UMZ2 1314 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 FLOT1O75955 427 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 VCAM1P19320 739 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 KMT5BQ4FZB7 885 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 C17orf53Q8N3J3 647 aaPredicted RBP18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 GJA10Q969M2 543 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 FAM20AQ96MK3 541 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 GTPBP4Q9BZE4 634 aaKnown RBP18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 TRIM9Q9C026 710 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 LRRC27Q9C0I9 530 aa18.17■□□□□ 0.5
SNRNP35-204ENST00000527158 CTDP1Q9Y5B0 961 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms