RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DAGLBQ8NCG7 672 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 RASGRP4Q8TDF6 673 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 SH3TC2Q8TF17 1288 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 INTS4Q96HW7 963 aaKnown RBP12.38□□□□□ -0.43
NEDD8-205ENST00000527046 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-205ENST00000527046 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 PDCD2LQ9BRP1 358 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 TINF2Q9BSI4 451 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 PXMP2Q9NR77 195 aa12.38□□□□□ -0.43
NEDD8-205ENST00000527046 GRK4P32298 578 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 ADCY7P51828 1080 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 MRPL12P52815 198 aaKnown RBP12.37□□□□□ -0.43
NEDD8-205ENST00000527046 UBXN2AP68543 259 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 HMGN5P82970 282 aaKnown RBP12.37□□□□□ -0.43
NEDD8-205ENST00000527046 CACNB2Q08289 660 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-205ENST00000527046 PGM5Q15124 567 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 PKN2Q16513 984 aaKnown RBP12.37□□□□□ -0.43
NEDD8-205ENST00000527046 TAPT1Q6NXT6 567 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 ARMCX2Q7L311 632 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
NEDD8-205ENST00000527046 DNERQ8NFT8 737 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 CUL5Q93034 780 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 ARMC5Q96C12 935 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 RMDN3Q96TC7 470 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 PCDHA4Q9UN74 947 aa12.37□□□□□ -0.43
NEDD8-205ENST00000527046 FAM205CA6NFA0 338 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 BTBD18B2RXH4 712 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 ADCY6O43306 1168 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 MMP1P03956 469 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 NR3C2P08235 984 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 CYBAP13498 195 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 PTGS1P23219 599 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 NLRP5P59047 1200 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 NR5A1Q13285 461 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 MTFR1Q15390 333 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 JAKMIP3Q5VZ66 844 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 TEX2Q8IWB9 1127 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 BLIDQ8IZY5 108 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
NEDD8-205ENST00000527046 RAET1EQ8TD07 263 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 NSUN6Q8TEA1 469 aaKnown RBP12.36□□□□□ -0.43
NEDD8-205ENST00000527046 C6orf50Q9HD87 102 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 PDGFCQ9NRA1 345 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.36□□□□□ -0.43
NEDD8-205ENST00000527046 MYH7BA7E2Y1 1941 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 HTTP42858 3142 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 SYNGAP1Q96PV0 1343 aa12.36□□□□□ -0.43
NEDD8-205ENST00000527046 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 RBM47A0AV96 593 aaKnown RBP12.35□□□□□ -0.43
NEDD8-205ENST00000527046 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 WNT7AO00755 349 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 INHAP05111 366 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 EIF2AK2P19525 551 aaKnown RBP12.35□□□□□ -0.43
NEDD8-205ENST00000527046 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
NEDD8-205ENST00000527046 FOSBP53539 338 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
NEDD8-205ENST00000527046 GALNT17Q6IS24 598 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 SLAIN1Q8ND83 568 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 CYP2W1Q8TAV3 490 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 WASF1Q92558 559 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 ZNF333Q96JL9 665 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 IWS1Q96ST2 819 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 ANO3Q9BYT9 981 aa12.35□□□□□ -0.43
NEDD8-205ENST00000527046 CWC22Q9HCG8 908 aaKnown RBP12.35□□□□□ -0.43
NEDD8-205ENST00000527046 ASB14A6NK59 587 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 HMGCRP04035 888 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 CYP3A4P08684 503 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 ITGB5P18084 799 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 GNA11P29992 359 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 SREBF1P36956 1147 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 SP2Q02086 613 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 SEMA3FQ13275 785 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 LHX8Q68G74 356 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 CCDC62Q6P9F0 684 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 TRMT44Q8IYL2 757 aaKnown RBP12.34□□□□□ -0.43
NEDD8-205ENST00000527046 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 CCDC12Q8WUD4 166 aaPredicted RBP12.34□□□□□ -0.43
NEDD8-205ENST00000527046 BCAS3Q9H6U6 928 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 SLC5A4Q9NY91 659 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
NEDD8-205ENST00000527046 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
NEDD8-205ENST00000527046 UBIAD1Q9Y5Z9 338 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 KIAA1217Q5T5P2 1943 aa12.34□□□□□ -0.43
NEDD8-205ENST00000527046 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-205ENST00000527046 ARIH2O95376 493 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.44
NEDD8-205ENST00000527046 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
NEDD8-205ENST00000527046 SYT1P21579 422 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 U2AF2P26368 475 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■□□□□ 10.9
NEDD8-205ENST00000527046 DDIT3P35638 169 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 AP3B2Q13367 1082 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 ACVR2BQ13705 512 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 PCNX4Q63HM2 1172 aa12.33□□□□□ -0.44
NEDD8-205ENST00000527046 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms