RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 FLT3LGP49771 235 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 LBX1P52954 281 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 PRKCZQ05513 592 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 IRF5Q13568 498 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 FCHSD1Q86WN1 690 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 OXER1Q8TDS5 423 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 NSUN6Q8TEA1 469 aaKnown RBP18.91■□□□□ 0.62
CAPN1-205ENST00000526954 PURBQ96QR8 312 aaKnown RBP18.91■□□□□ 0.62
CAPN1-205ENST00000526954 RMDN3Q96TC7 470 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 APBA2Q99767 749 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 FOXP1Q9H334 677 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-205ENST00000526954 PXMP2Q9NR77 195 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 TMEM260Q9NX78 707 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 RPTORQ8N122 1335 aa18.91■□□□□ 0.62
CAPN1-205ENST00000526954 MYH7BA7E2Y1 1941 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 BTBD18B2RXH4 712 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 STX6O43752 255 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 U2AF2P26368 475 aaKnown RBP eCLIP18.9■□□□□ 0.62
CAPN1-205ENST00000526954 JAKMIP3Q5VZ66 844 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 OTOP1Q7RTM1 612 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 MSL3Q8N5Y2 521 aaKnown RBP18.9■□□□□ 0.62
CAPN1-205ENST00000526954 NPLOC4Q8TAT6 608 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 RASGRP4Q8TDF6 673 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 IPO9Q96P70 1041 aaKnown RBP18.9■□□□□ 0.62
CAPN1-205ENST00000526954 IWS1Q96ST2 819 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 ASTN1O14525 1302 aa18.9■□□□□ 0.62
CAPN1-205ENST00000526954 IGHA2P01877 340 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 CYP2B6P20813 491 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 ALDH5A1P51649 535 aaPredicted RBP18.89■□□□□ 0.61
CAPN1-205ENST00000526954 NR5A1Q13285 461 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 MAMDC4Q6UXC1 1216 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 MORC4Q8TE76 937 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 MAML3Q96JK9 1138 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 ANO3Q9BYT9 981 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 EHMT1Q9H9B1 1298 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 MTMR6Q9Y217 621 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 TRIM17Q9Y577 477 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 MCM3APO60318 1980 aa18.89■□□□□ 0.61
CAPN1-205ENST00000526954 ASB14A6NK59 587 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 B4DLN1 442 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 EDNRBP24530 442 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 DDIT3P35638 169 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 SREBF1P36956 1147 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 ARHGEF16Q5VV41 709 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 OLFML2BQ68BL8 750 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 TRMT44Q8IYL2 757 aaKnown RBP18.88■□□□□ 0.61
CAPN1-205ENST00000526954 CRYGNQ8WXF5 182 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 PDCD2LQ9BRP1 358 aa18.88■□□□□ 0.61
CAPN1-205ENST00000526954 CCDC194A0A1B0GVG4 234 aa18.87■□□□□ 0.61
CAPN1-205ENST00000526954 VPS37CA5D8V6 355 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-205ENST00000526954 LRRC37A2A6NM11 1700 aa18.87■□□□□ 0.61
CAPN1-205ENST00000526954 PGM5Q15124 567 aa18.87■□□□□ 0.61
CAPN1-205ENST00000526954 NONOQ15233 471 aaKnown RBP eCLIP18.87■□□□□ 0.61
CAPN1-205ENST00000526954 XRRA1Q6P2D8 792 aa18.87■□□□□ 0.61
CAPN1-205ENST00000526954 NOSTRINQ8IVI9 506 aa18.87■□□□□ 0.61
CAPN1-205ENST00000526954 PGBD1Q96JS3 809 aa18.87■□□□□ 0.61
CAPN1-205ENST00000526954 MPHOSPH6Q99547 160 aaKnown RBP18.87■□□□□ 0.61
CAPN1-205ENST00000526954 PRDM10Q9NQV6 1147 aa18.87■□□□□ 0.61
CAPN1-205ENST00000526954 SYNGAP1Q96PV0 1343 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 KIF28PB7ZC32 967 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 NR3C2P08235 984 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 CYP3A4P08684 503 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 EIF2AK2P19525 551 aaKnown RBP18.86■□□□□ 0.61
CAPN1-205ENST00000526954 EARS2Q5JPH6 523 aaKnown RBP18.86■□□□□ 0.61
CAPN1-205ENST00000526954 PCNX4Q63HM2 1172 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 MCTP1Q6DN14 999 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 PIK3AP1Q6ZUJ8 805 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 VSIG10LQ86VR7 867 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 PXYLP1Q8TE99 480 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 TINF2Q9BSI4 451 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 FLRT1Q9NZU1 646 aa18.86■□□□□ 0.61
CAPN1-205ENST00000526954 KIAA1217Q5T5P2 1943 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 USP11P51784 963 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 ARHGAP4P98171 946 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 GNL2Q13823 731 aaKnown RBP18.85■□□□□ 0.61
CAPN1-205ENST00000526954 CCL14Q16627 93 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 CTU1Q7Z7A3 348 aaKnown RBP18.85■□□□□ 0.61
CAPN1-205ENST00000526954 IL31RAQ8NI17 732 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 RAET1EQ8TD07 263 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 TBCKQ8TEA7 893 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 PTPN22Q9Y2R2 807 aa18.85■□□□□ 0.61
CAPN1-205ENST00000526954 EDIL3O43854 480 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 ADCY3O60266 1144 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 STAM2O75886 525 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 SNAI1O95863 264 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-205ENST00000526954 CCND2P30279 289 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 PDE4DQ08499 809 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 STXBP2Q15833 593 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 ARMCX2Q7L311 632 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 BRAPQ7Z569 592 aa18.84■□□□□ 0.61
CAPN1-205ENST00000526954 EIF3JO75822 258 aaKnown RBP18.83■□□□□ 0.6
CAPN1-205ENST00000526954 BRD1O95696 1058 aa18.83■□□□□ 0.6
CAPN1-205ENST00000526954 ZSCAN22P10073 491 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-205ENST00000526954 CIITAP33076 1130 aa18.83■□□□□ 0.6
CAPN1-205ENST00000526954 UBXN2AP68543 259 aa18.83■□□□□ 0.6
CAPN1-205ENST00000526954 MRPS9P82933 396 aaKnown RBP18.83■□□□□ 0.6
CAPN1-205ENST00000526954 RESTQ13127 1097 aa18.83■□□□□ 0.6
CAPN1-205ENST00000526954 PKP1Q13835 747 aa18.83■□□□□ 0.6
CAPN1-205ENST00000526954 PKN2Q16513 984 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 409.2 ms