RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CCT2P78371 535 aaKnown RBP18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 RNF180Q86T96 592 aa18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 FCHSD1Q86WN1 690 aa18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 ZNF274Q96GC6 653 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 SENP6Q9GZR1 1112 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 PXMP2Q9NR77 195 aa18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
SSSCA1-202ENST00000526433 RBM47A0AV96 593 aaKnown RBP18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 KBTBD13C9JR72 458 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 ADAMTS4O75173 837 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 NR3C2P08235 984 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 SMPD1P17405 629 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 STXBP2Q15833 593 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 TMEM63BQ5T3F8 832 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 HEATR3Q7Z4Q2 680 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 GPKOWQ92917 476 aaPredicted RBP eCLIP18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 SYNRGQ9UMZ2 1314 aa18.7■□□□□ 0.58
SSSCA1-202ENST00000526433 NID2Q14112 1375 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 DYNC1LI2O43237 492 aaPredicted RBP18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 GJA9P57773 515 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 IRX5P78411 483 aaPredicted RBP18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 USP17L6PQ6QN14 398 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 KLHDC9Q8NEP7 349 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 CUL5Q93034 780 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 WDR11Q9BZH6 1224 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 UPF3AQ9H1J1 476 aaKnown RBP18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 PSTPIP2Q9H939 334 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 SPC25Q9HBM1 224 aa18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 NCOA5Q9HCD5 579 aaKnown RBP18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 GNEQ9Y223 722 aaKnown RBP18.69■□□□□ 0.58
SSSCA1-202ENST00000526433 MEIS2O14770 477 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 PRPF3O43395 683 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 EIF3JO75822 258 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 C6orf222P0C671 652 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 MYCLP12524 364 aaPredicted RBP18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 NTRK3Q16288 839 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 FERMT2Q96AC1 680 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 PDCD2LQ9BRP1 358 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 TSEN34Q9BSV6 310 aaKnown RBP18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 AP5M1Q9H0R1 490 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 Q9Y3F1 56 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 LRRC37A2A6NM11 1700 aa18.68■□□□□ 0.58
SSSCA1-202ENST00000526433 CEP290O15078 2479 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 MYADML2A6NDP7 307 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 PIK3CDO00329 1044 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 PTGS1P23219 599 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 STK3Q13188 491 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 PGM5Q15124 567 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 KCNA10Q16322 511 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 DUSP28Q4G0W2 176 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 GNASQ5JWF2 1037 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 SEPT14Q6ZU15 432 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 VSIG10LQ86VR7 867 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 SCFD2Q8WU76 684 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 PHKBQ93100 1093 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 PHF24Q9UPV7 400 aa18.67■□□□□ 0.58
SSSCA1-202ENST00000526433 STXBP3O00186 592 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 CTAGE5O15320 804 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 EVI5O60447 810 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 IFNAR1P17181 557 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 NEK4P51957 841 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 AK2P54819 239 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 NAPAP54920 295 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 NKX3-2P78367 333 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 AKAP17AQ02040 695 aaKnown RBP18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 ANKRD1Q15327 319 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 PFKFB3Q16875 520 aaPredicted RBP18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 CCSAPQ6IQ19 270 aaPredicted RBP18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 TYW1BQ6NUM6 668 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 TLK2Q86UE8 772 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 IL31RAQ8NI17 732 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 BARHL2Q9NY43 387 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 RBM27Q9P2N5 1060 aaKnown RBP18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 TPCN1Q9ULQ1 816 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 KIAA1217Q5T5P2 1943 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 ALPK3Q96L96 1907 aa18.66■□□□□ 0.58
SSSCA1-202ENST00000526433 hCG_1984214I3L0E3 225 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 PPFIA3O75145 1194 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 TXNP10599 105 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 SCG2P13521 617 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 CST5P28325 142 aaPredicted RBP18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 ACLYP53396 1101 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 ATN1P54259 1190 aaPredicted RBP18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 BEX3Q00994 111 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 TTLL4Q14679 1199 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 PKN1Q16512 942 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 LRRC26Q2I0M4 334 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 CCDC62Q6P9F0 684 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 SLC39A5Q6ZMH5 540 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 ZNF713Q8N859 430 aaPredicted RBP18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 PCSK9Q8NBP7 692 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 SLC26A6Q9BXS9 759 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 C22orf23Q9BZE7 217 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 NR2E3Q9Y5X4 410 aa18.65■□□□□ 0.58
SSSCA1-202ENST00000526433 SMCO2A6NFE2 343 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 CPLX1O14810 134 aa18.64■□□□□ 0.57
SSSCA1-202ENST00000526433 NKRFO15226 690 aaKnown RBP eCLIP18.64■□□□□ 0.573e-6■□□□□ 8.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms