RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 WWC2Q6AWC2 1192 aa8.65□□□□□ -1.02
COPB1-204ENST00000526191 CNKSR3Q6P9H4 555 aa8.65□□□□□ -1.02
COPB1-204ENST00000526191 CCDC103Q8IW40 242 aa8.65□□□□□ -1.02
COPB1-204ENST00000526191 BTG4Q9NY30 223 aa8.65□□□□□ -1.02
COPB1-204ENST00000526191 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■■□□□ 11.5
COPB1-204ENST00000526191 ATF2P15336 505 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 HOXC12P31275 282 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 DDR2Q16832 855 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 VMACQ2NL98 169 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 EEPD1Q7L9B9 569 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 TEX2Q8IWB9 1127 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 NETO2Q8NC67 525 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 KREMEN2Q8NCW0 462 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 PLEKHO2Q8TD55 490 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 SIT1Q9Y3P8 196 aa8.64□□□□□ -1.03
COPB1-204ENST00000526191 NTRK1P04629 796 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 SCG5P05408 212 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 PFKLP17858 780 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 MC3RP41968 323 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 GRIA2P42262 883 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 KCNJ6P48051 423 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 NAALADL2Q58DX5 795 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 TMEM151BQ8IW70 566 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 ALG3Q92685 438 aa8.63□□□□□ -1.03
COPB1-204ENST00000526191 CAPNS1P04632 268 aa8.62□□□□□ -1.03
COPB1-204ENST00000526191 ASGR2P07307 311 aa8.62□□□□□ -1.03
COPB1-204ENST00000526191 GFRA1P56159 465 aa8.62□□□□□ -1.03
COPB1-204ENST00000526191 ZC3H6P61129 1189 aaKnown RBP8.62□□□□□ -1.03
COPB1-204ENST00000526191 TARBP2Q15633 366 aaKnown RBP8.62□□□□□ -1.03
COPB1-204ENST00000526191 DENND5AQ6IQ26 1287 aa8.62□□□□□ -1.03
COPB1-204ENST00000526191 TMEM145Q8NBT3 493 aa8.62□□□□□ -1.03
COPB1-204ENST00000526191 TSPAN17Q96FV3 270 aa8.62□□□□□ -1.03
COPB1-204ENST00000526191 PWWP2AQ96N64 755 aa8.62□□□□□ -1.03
COPB1-204ENST00000526191 MEFVO15553 781 aaPredicted RBP8.61□□□□□ -1.03
COPB1-204ENST00000526191 TRIM13O60858 407 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 INHBBP09529 407 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 BMP7P18075 431 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 FPR2P25090 351 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 PMLP29590 882 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 PPP2R2AP63151 447 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 E4F1Q66K89 784 aaPredicted RBP8.61□□□□□ -1.03
COPB1-204ENST00000526191 DIO2Q92813 273 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 PEX11GQ96HA9 241 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 EPN3Q9H201 632 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 FBXL7Q9UJT9 491 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 NUDT5Q9UKK9 219 aa8.61□□□□□ -1.03
COPB1-204ENST00000526191 A0A1W2PQU0 124 aa8.6□□□□□ -1.03
COPB1-204ENST00000526191 C22orf46C9J442 243 aa8.6□□□□□ -1.03
COPB1-204ENST00000526191 LCP1P13796 627 aa8.6□□□□□ -1.03
COPB1-204ENST00000526191 TTLL10Q6ZVT0 673 aa8.6□□□□□ -1.03
COPB1-204ENST00000526191 NLRP10Q86W26 655 aa8.6□□□□□ -1.03
COPB1-204ENST00000526191 PPIL6Q8IXY8 311 aa8.6□□□□□ -1.03
COPB1-204ENST00000526191 C1orf159Q96HA4 380 aa8.6□□□□□ -1.03
COPB1-204ENST00000526191 CPP00450 1065 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 PLA2G1BP04054 148 aaKnown RBP8.59□□□□□ -1.03
COPB1-204ENST00000526191 NCAM1P13591 858 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 BCL6P41182 706 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 RPL11P62913 178 aaKnown RBP8.59□□□□□ -1.03
COPB1-204ENST00000526191 KCNAB2Q13303 367 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 RAB33AQ14088 237 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 IQCEQ6IPM2 695 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 RCBTB1Q8NDN9 531 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
COPB1-204ENST00000526191 TIMM13Q9Y5L4 95 aaPredicted RBP8.59□□□□□ -1.03
COPB1-204ENST00000526191 AGRPO00253 132 aa8.58□□□□□ -1.04
COPB1-204ENST00000526191 FOXO4P98177 505 aa8.58□□□□□ -1.04
COPB1-204ENST00000526191 LCE1DQ5T752 114 aa8.58□□□□□ -1.04
COPB1-204ENST00000526191 ACBD5Q5T8D3 534 aaPredicted RBP8.58□□□□□ -1.04
COPB1-204ENST00000526191 KCNC2Q96PR1 638 aa8.58□□□□□ -1.04
COPB1-204ENST00000526191 RNF38Q9H0F5 515 aa8.58□□□□□ -1.04
COPB1-204ENST00000526191 STK10O94804 968 aaKnown RBP8.57□□□□□ -1.04
COPB1-204ENST00000526191 SLC9A5Q14940 896 aa8.57□□□□□ -1.04
COPB1-204ENST00000526191 SLC35F1Q5T1Q4 408 aa8.57□□□□□ -1.04
COPB1-204ENST00000526191 CEP68Q76N32 757 aa8.57□□□□□ -1.04
COPB1-204ENST00000526191 MARCH10Q8NA82 808 aaPredicted RBP8.57□□□□□ -1.04
COPB1-204ENST00000526191 TP53I13Q8NBR0 393 aaPredicted RBP8.57□□□□□ -1.04
COPB1-204ENST00000526191 IER2Q9BTL4 223 aa8.57□□□□□ -1.04
COPB1-204ENST00000526191 ZCCHC4Q9H5U6 513 aa8.57□□□□□ -1.04
COPB1-204ENST00000526191 PARD6AQ9NPB6 346 aa8.57□□□□□ -1.04
COPB1-204ENST00000526191 FAN1Q9Y2M0 1017 aa8.57□□□□□ -1.04
COPB1-204ENST00000526191 RB1CC1Q8TDY2 1594 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 FFAR3O14843 346 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 SGSM2O43147 1006 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 HOXA5P20719 270 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 LTBRP36941 435 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 TESK1Q15569 626 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 DCP2Q8IU60 420 aaKnown RBP8.56□□□□□ -1.04
COPB1-204ENST00000526191 Q8N1Y9 231 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 FNIP1Q8TF40 1166 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 TRIM55Q9BYV6 548 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 PCDHA2Q9Y5H9 948 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 PMF1-BGLAPU3KQ54 211 aa8.56□□□□□ -1.04
COPB1-204ENST00000526191 MYO1BO43795 1136 aa8.55□□□□□ -1.04
COPB1-204ENST00000526191 VWA3BQ502W6 1294 aa8.55□□□□□ -1.04
COPB1-204ENST00000526191 B3GNT8Q7Z7M8 397 aa8.55□□□□□ -1.04
COPB1-204ENST00000526191 SMARCC2Q8TAQ2 1214 aa8.55□□□□□ -1.04
COPB1-204ENST00000526191 TRMT2BQ96GJ1 504 aaKnown RBP8.55□□□□□ -1.04
COPB1-204ENST00000526191 NOX5Q96PH1 765 aa8.55□□□□□ -1.04
COPB1-204ENST00000526191 TANGO6Q9C0B7 1094 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms