RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PIGSQ96S52 555 aa21.38■■□□□ 1.01
TSPAN4-216ENST00000526055 RMDN3Q96TC7 470 aa21.38■■□□□ 1.01
TSPAN4-216ENST00000526055 OPLAHO14841 1288 aa21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 CFBP00751 764 aa21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 HMGB1P09429 215 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 CDK7P50613 346 aa21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 PPP2R5BQ15173 497 aa21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 VTI1AQ96AJ9 217 aa21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 TAAR1Q96RJ0 339 aa21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 SLC12A7Q9Y666 1083 aa21.37■■□□□ 1.01
TSPAN4-216ENST00000526055 ARVCFO00192 962 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 KIAA0355O15063 1070 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 CPT1AP50416 773 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 IRX5P78411 483 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 MDM2Q00987 491 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 BEX3Q00994 111 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 TTLL4Q14679 1199 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 STXBP2Q15833 593 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 BRDTQ58F21 947 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 ARHGEF16Q5VV41 709 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 RRP36Q96EU6 259 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 PRDM5Q9NQX1 630 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 GPHNQ9NQX3 736 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 COL20A1Q9P218 1284 aa21.36■■□□□ 1.01
TSPAN4-216ENST00000526055 LAMA3Q16787 3333 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 EPB41L2O43491 1005 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 PQBP1O60828 265 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 LRIT3Q3SXY7 679 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 SYNE3Q6ZMZ3 975 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 DHX32Q7L7V1 743 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 SLC43A3Q8NBI5 491 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 KCNB2Q92953 911 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 PXMP2Q9NR77 195 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 POLR3EQ9NVU0 708 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
TSPAN4-216ENST00000526055 TRIM43BA6NCK2 446 aa21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 GCOM1H8Y6P7 765 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 EIF3JO75822 258 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 REC8O95072 547 aa21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 POLR2MP0CAP2 368 aa21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 EXOSC10Q01780 885 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 FAAP100Q0VG06 881 aa21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 CXCL17Q6UXB2 119 aa21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 TRIM43Q96BQ3 446 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 MYL10Q9BUA6 226 aa21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 SEC63Q9UGP8 760 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 BAZ2BQ9UIF8 2168 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-216ENST00000526055 TLR3O15455 904 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 KPNA6O60684 536 aa21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 NR3C2P08235 984 aa21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 TXNP10599 105 aaKnown RBP21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 SH3RF1Q7Z6J0 888 aa21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 RASEFQ8IZ41 740 aa21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 OR6J1Q8NGC5 347 aa21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 TMEM39AQ9NV64 488 aa21.33■■□□□ 1.01
TSPAN4-216ENST00000526055 EIF2AK2P19525 551 aaKnown RBP21.32■■□□□ 1
TSPAN4-216ENST00000526055 RCAN1P53805 252 aa21.32■■□□□ 1
TSPAN4-216ENST00000526055 COL9A3Q14050 684 aaPredicted RBP21.32■■□□□ 1
TSPAN4-216ENST00000526055 TMEM63BQ5T3F8 832 aa21.32■■□□□ 1
TSPAN4-216ENST00000526055 GPR153Q6NV75 609 aa21.32■■□□□ 1
TSPAN4-216ENST00000526055 CCDC62Q6P9F0 684 aa21.32■■□□□ 1
TSPAN4-216ENST00000526055 FANCBQ8NB91 859 aa21.32■■□□□ 1
TSPAN4-216ENST00000526055 PDCD2LQ9BRP1 358 aa21.32■■□□□ 1
TSPAN4-216ENST00000526055 LTBP2Q14767 1821 aa21.32■■□□□ 1
TSPAN4-216ENST00000526055 A6NJR5 290 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 RAG1P15918 1043 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 HSPA4P34932 840 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 ITGA7Q13683 1181 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 KCNV1Q6PIU1 500 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 FAM126BQ8IXS8 530 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 SRBD1Q8N5C6 995 aaKnown RBP21.31■■□□□ 1
TSPAN4-216ENST00000526055 BADQ92934 168 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 LRRC2Q9BYS8 371 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 RBM28Q9NW13 759 aaKnown RBP21.31■■□□□ 1
TSPAN4-216ENST00000526055 TBX21Q9UL17 535 aa21.31■■□□□ 1
TSPAN4-216ENST00000526055 PLEKHA8P1O95397 391 aa21.3■■□□□ 1
TSPAN4-216ENST00000526055 PURAQ00577 322 aaKnown RBP21.3■■□□□ 1
TSPAN4-216ENST00000526055 ADCK5Q3MIX3 580 aa21.3■■□□□ 1
TSPAN4-216ENST00000526055 APOA5Q6Q788 366 aa21.3■■□□□ 1
TSPAN4-216ENST00000526055 TMTC3Q6ZXV5 915 aa21.3■■□□□ 1
TSPAN4-216ENST00000526055 ARIH2O95376 493 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 TIMP1P01033 207 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 GH1P01241 217 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 CD4P01730 458 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 PTGS1P23219 599 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 HOXA13P31271 388 aaPredicted RBP21.29■■□□□ 1
TSPAN4-216ENST00000526055 PGM5Q15124 567 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 SEPT14Q6ZU15 432 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 VSIG10LQ86VR7 867 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 MICU3Q86XE3 530 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 CUL5Q93034 780 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 MTG1Q9BT17 334 aaPredicted RBP21.29■■□□□ 1
TSPAN4-216ENST00000526055 FRMPD4Q14CM0 1322 aa21.29■■□□□ 1
TSPAN4-216ENST00000526055 PIK3CDO00329 1044 aa21.28■■□□□ 1
TSPAN4-216ENST00000526055 STAM2O75886 525 aa21.28■■□□□ 1
TSPAN4-216ENST00000526055 RXRAP19793 462 aa21.28■■□□□ 1
TSPAN4-216ENST00000526055 CCND2P30279 289 aa21.28■■□□□ 1
TSPAN4-216ENST00000526055 TEX2Q8IWB9 1127 aa21.28■■□□□ 1
TSPAN4-216ENST00000526055 EMID1Q96A84 441 aaPredicted RBP21.28■■□□□ 1
TSPAN4-216ENST00000526055 GRIN2DO15399 1336 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms