RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ORC4O43929 436 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 PDHBP11177 359 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 ZNF200P98182 395 aaPredicted RBP7.73□□□□□ -1.17
CD44-221ENST00000526000 GRB10Q13322 594 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 PTGISQ16647 500 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 TCTN1Q2MV58 587 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 BRDTQ58F21 947 aaPredicted RBP7.73□□□□□ -1.17
CD44-221ENST00000526000 PPP4R3BQ5MIZ7 849 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 GDF6Q6KF10 455 aaPredicted RBP7.73□□□□□ -1.17
CD44-221ENST00000526000 BTNL9Q6UXG8 535 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 ZNF589Q86UQ0 364 aaPredicted RBP7.73□□□□□ -1.17
CD44-221ENST00000526000 HERC6Q8IVU3 1022 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 ANAPC4Q9UJX5 808 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 PARP14Q460N5 1801 aa7.73□□□□□ -1.17
CD44-221ENST00000526000 PRRC2BQ5JSZ5 2229 aaKnown RBP7.72□□□□□ -1.17
CD44-221ENST00000526000 UNC80Q8N2C7 3258 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 LAMA2P24043 3122 aaKnown RBP7.72□□□□□ -1.17
CD44-221ENST00000526000 DHX16O60231 1041 aaKnown RBP7.72□□□□□ -1.17
CD44-221ENST00000526000 HSPD1P10809 573 aaKnown RBP7.72□□□□□ -1.17
CD44-221ENST00000526000 KCNJ6P48051 423 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 DEFB103AP81534 67 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 ZNF543Q08ER8 600 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 BFSP2Q13515 415 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 GPNMBQ14956 572 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 ALX1Q15699 326 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 MCMDC2Q4G0Z9 681 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 B4GALNT3Q6L9W6 998 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 MFSD6Q6ZSS7 791 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 GDPD5Q8WTR4 605 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 SCFD2Q8WU76 684 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 KHSRPQ92945 711 aaKnown RBP eCLIP7.72□□□□□ -1.17
CD44-221ENST00000526000 EVI5LQ96CN4 794 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 FAM122AQ96E09 287 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 CRBNQ96SW2 442 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 HELLSQ9NRZ9 838 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 COL20A1Q9P218 1284 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 HDAC6Q9UBN7 1215 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 PRUNE2Q8WUY3 3088 aa7.72□□□□□ -1.17
CD44-221ENST00000526000 PLIN4Q96Q06 1357 aa7.71□□□□□ -1.17
CD44-221ENST00000526000 A6NJR5 290 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 GH1P01241 217 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 FGRP09769 529 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 MYCLP12524 364 aaPredicted RBP7.71□□□□□ -1.18
CD44-221ENST00000526000 EIF2AK2P19525 551 aaKnown RBP7.71□□□□□ -1.18
CD44-221ENST00000526000 PDE1AP54750 535 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 AAMPQ13685 434 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 AAK1Q2M2I8 961 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 EP400NLQ6ZTU2 488 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 TBC1D10CQ8IV04 446 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 SYTL5Q8TDW5 730 aaPredicted RBP7.71□□□□□ -1.18
CD44-221ENST00000526000 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.18
CD44-221ENST00000526000 KAT2BQ92831 832 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 HLA-CQ95604 372 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 SLC9A7Q96T83 725 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 LRFN3Q9BTN0 628 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 SEZ6LQ9BYH1 1024 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 CD320Q9NPF0 282 aa7.71□□□□□ -1.18
CD44-221ENST00000526000 MYH4Q9Y623 1939 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 B4DLN1 442 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 B4E1Z4 1266 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 NKRFO15226 690 aaKnown RBP eCLIP7.7□□□□□ -1.18
CD44-221ENST00000526000 KPNA6O60684 536 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 LPXNO60711 386 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 NBNO60934 754 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 KDM4AO75164 1064 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 CFBP00751 764 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 PFKMP08237 780 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 MMP3P08254 477 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 ZNF286BP0CG31 522 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 CASTP20810 708 aaKnown RBP7.7□□□□□ -1.18
CD44-221ENST00000526000 NOVP48745 357 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 PSEN2P49810 448 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 MRPL12P52815 198 aaKnown RBP7.7□□□□□ -1.18
CD44-221ENST00000526000 RRP1P56182 461 aaKnown RBP7.7□□□□□ -1.18
CD44-221ENST00000526000 WDR5P61964 334 aaKnown RBP7.7□□□□□ -1.18
CD44-221ENST00000526000 CDC37Q16543 378 aaPredicted RBP7.7□□□□□ -1.18
CD44-221ENST00000526000 ARHGEF16Q5VV41 709 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 NFRKBQ6P4R8 1299 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 CCDC62Q6P9F0 684 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.7□□□□□ -1.18
CD44-221ENST00000526000 ADGRF4Q8IZF3 695 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 C7orf31Q8N865 590 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 PHOSPHO2Q8TCD6 241 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 WNT8BQ93098 351 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 UIMC1Q96RL1 719 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 CTAGE1Q96RT6 745 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 RMDN3Q96TC7 470 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 MPHOSPH6Q99547 160 aaKnown RBP7.7□□□□□ -1.18
CD44-221ENST00000526000 LNPKQ9C0E8 428 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 BCAS3Q9H6U6 928 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 SUGCTQ9HAC7 445 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 TCP11L1Q9NUJ3 509 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 RAD50Q92878 1312 aa7.7□□□□□ -1.18
CD44-221ENST00000526000 GREB1LQ9C091 1923 aaPredicted RBP7.7□□□□□ -1.18
CD44-221ENST00000526000 ZNF213O14771 459 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 UPP2O95045 317 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 CSPG5O95196 566 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 NR3C2P08235 984 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 CKBP12277 381 aa7.69□□□□□ -1.18
CD44-221ENST00000526000 SELPP16109 830 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms