RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 NECTIN1Q15223 517 aa14.6□□□□□ -0.07
SMCO4-202ENST00000525141 NCOA7Q8NI08 942 aa14.6□□□□□ -0.07
SMCO4-202ENST00000525141 MAF1Q9H063 256 aa14.6□□□□□ -0.07
SMCO4-202ENST00000525141 ANO2Q9NQ90 1003 aa14.6□□□□□ -0.07
SMCO4-202ENST00000525141 CABYRO75952 493 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 GHRHRQ02643 423 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 PDE4DQ08499 809 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 TRDNQ13061 729 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 MFSD5Q6N075 450 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 VWCEQ96DN2 955 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 PIGSQ96S52 555 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 TRPV6Q9H1D0 765 aa14.59□□□□□ -0.07
SMCO4-202ENST00000525141 MRPL11Q9Y3B7 192 aaKnown RBP14.59□□□□□ -0.07
SMCO4-202ENST00000525141 MYH6P13533 1939 aa14.58□□□□□ -0.07
SMCO4-202ENST00000525141 A6NJR5 290 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 ZBTB5O15062 677 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 EPB41L2O43491 1005 aaKnown RBP14.58□□□□□ -0.08
SMCO4-202ENST00000525141 HSD17B4P51659 736 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 PURAQ00577 322 aaKnown RBP14.58□□□□□ -0.08
SMCO4-202ENST00000525141 WTAPQ15007 396 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 FAM109BQ6ICB4 259 aaPredicted RBP14.58□□□□□ -0.08
SMCO4-202ENST00000525141 PPP1R13LQ8WUF5 828 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 AMNQ9BXJ7 453 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 LY9Q9HBG7 655 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 UMODL1Q5DID0 1318 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 COL6A3P12111 3177 aa14.58□□□□□ -0.08
SMCO4-202ENST00000525141 SLC27A2O14975 620 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 DHX16O60231 1041 aaKnown RBP14.57□□□□□ -0.08
SMCO4-202ENST00000525141 ZEB2O60315 1214 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 B4GALT4O60513 344 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 RGS20O76081 388 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 REC8O95072 547 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 TXNP10599 105 aaKnown RBP14.57□□□□□ -0.08
SMCO4-202ENST00000525141 CSF2RAP15509 400 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 CYP2C18P33260 490 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 FPGSQ05932 587 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 LY6KQ17RY6 165 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 TMEM240Q5SV17 173 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 MCF2L2Q86YR7 1114 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 NSUN6Q8TEA1 469 aaKnown RBP14.57□□□□□ -0.08
SMCO4-202ENST00000525141 IWS1Q96ST2 819 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 RMDN3Q96TC7 470 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMCO4-202ENST00000525141 PCDHA1Q9Y5I3 950 aa14.57□□□□□ -0.08
SMCO4-202ENST00000525141 CFBP00751 764 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 NR3C2P08235 984 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 TSGA10IPQ3SY00 556 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 CREB3L3Q68CJ9 461 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 SEPT14Q6ZU15 432 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 SCFD2Q8WU76 684 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 GUCD1Q96NT3 240 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 PPP1R12CQ9BZL4 782 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 SEMA6BQ9H3T3 888 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 PXMP2Q9NR77 195 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 DDX41Q9UJV9 622 aaKnown RBP14.56□□□□□ -0.08
SMCO4-202ENST00000525141 MROH7Q68CQ1 1323 aa14.56□□□□□ -0.08
SMCO4-202ENST00000525141 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 NKRFO15226 690 aaKnown RBP eCLIP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 MYL3P08590 195 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 ACRP10323 421 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 EIF2AK2P19525 551 aaKnown RBP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 ARHGAP1Q07960 439 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 NBPF20Q3BBV1 942 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 RASIP1Q5U651 963 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 RALYLQ86SE5 291 aaKnown RBP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 VSIG10LQ86VR7 867 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 ZFP91Q96JP5 570 aaPredicted RBP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 FAM161BQ96MY7 647 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 MYL10Q9BUA6 226 aa14.55□□□□□ -0.08
SMCO4-202ENST00000525141 NOC4LQ9BVI4 516 aaKnown RBP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 ALDH8A1Q9H2A2 487 aaPredicted RBP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 TTYH1Q9H313 450 aaPredicted RBP14.55□□□□□ -0.08
SMCO4-202ENST00000525141 ERICH2A1L162 156 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 RBAK-RBAKDNI3L0D1 243 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 SH2B2O14492 632 aaPredicted RBP14.54□□□□□ -0.08
SMCO4-202ENST00000525141 TLR3O15455 904 aaKnown RBP14.54□□□□□ -0.08
SMCO4-202ENST00000525141 PRC1O43663 620 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 EIF5BO60841 1220 aaKnown RBP14.54□□□□□ -0.08
SMCO4-202ENST00000525141 EIF3JO75822 258 aaKnown RBP14.54□□□□□ -0.08
SMCO4-202ENST00000525141 SMAD3P84022 425 aaKnown RBP14.54□□□□□ -0.08
SMCO4-202ENST00000525141 TTLL4Q14679 1199 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 PPP2R5BQ15173 497 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 STXBP2Q15833 593 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 ARHGEF16Q5VV41 709 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 ZNF365Q70YC5 407 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 HOMER1Q86YM7 354 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 SRBD1Q8N5C6 995 aaKnown RBP14.54□□□□□ -0.08
SMCO4-202ENST00000525141 IL31RAQ8NI17 732 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 AFG1LQ8WV93 481 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 KAT2BQ92831 832 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 MAP3K14Q99558 947 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 PDCD2LQ9BRP1 358 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 MTG1Q9BT17 334 aaPredicted RBP14.54□□□□□ -0.08
SMCO4-202ENST00000525141 MTA3Q9BTC8 594 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 SEZ6LQ9BYH1 1024 aa14.54□□□□□ -0.08
SMCO4-202ENST00000525141 WNT8AQ9H1J5 351 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms