RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PARP14Q460N5 1801 aa5.29□□□□□ -1.56
CHMP4A-202ENST00000524955 PLXNB2O15031 1838 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 MYADML2A6NDP7 307 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 ARIH2O95376 493 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 DEXIO95424 95 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 PGK1P00558 417 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 TFRCP02786 760 aaKnown RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 NR3C2P08235 984 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 ZNF865P0CJ78 1059 aaPredicted RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 CYBAP13498 195 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 ATP2B1P20020 1258 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 CHMP4BP1P59074 171 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 BEX3Q00994 111 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 SP4Q02446 784 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 NR5A1Q13285 461 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 ACVR2BQ13705 512 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 PGM5Q15124 567 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 PPP2R5BQ15173 497 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 NPY5RQ15761 445 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 LY6KQ17RY6 165 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 CCDC144BQ3MJ40 725 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 EARS2Q5JPH6 523 aaKnown RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 FOXD4L5Q5VV16 416 aaPredicted RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 OLFML2BQ68BL8 750 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 KRT40Q6A162 431 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 TAPT1Q6NXT6 567 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 FAM184AQ8NB25 1140 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 CYP2W1Q8TAV3 490 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 PXYLP1Q8TE99 480 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 DIS3LQ8TF46 1054 aaKnown RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 FOXD4L4Q8WXT5 416 aaPredicted RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 GJA10Q969M2 543 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 ARMC5Q96C12 935 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 PDCD2LQ9BRP1 358 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 ANO3Q9BYT9 981 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 HMX1Q9NP08 348 aaPredicted RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 RIC8AQ9NPQ8 531 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 SH2B1Q9NRF2 756 aaPredicted RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 SLC5A4Q9NY91 659 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 ADD3Q9UEY8 706 aaKnown RBP5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 CNPY2Q9Y2B0 182 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 TELO2Q9Y4R8 837 aa5.28□□□□□ -1.56
CHMP4A-202ENST00000524955 RPTORQ8N122 1335 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 ASB14A6NK59 587 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 SPDYE3A6NKU9 549 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 BTBD18B2RXH4 712 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 KIF28PB7ZC32 967 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 K7ELQ4 463 aaPredicted RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 WNT7AO00755 349 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 DYNC1LI2O43237 492 aaPredicted RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 CDKL5O76039 1030 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 RGS20O76081 388 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 IGHA2P01877 340 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 SMPD1P17405 629 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 GJB2P29033 226 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 CCND2P30279 289 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 CLK2P49760 499 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 MRPL12P52815 198 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 MRPS9P82933 396 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 TNFAIP2Q03169 654 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 INF2Q27J81 1249 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 MAP3K21Q5TCX8 1036 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 LHX8Q68G74 356 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 MAMDC4Q6UXC1 1216 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 PIK3AP1Q6ZUJ8 805 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 HSCBQ8IWL3 235 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 RGS22Q8NE09 1264 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 DNERQ8NFT8 737 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 NSUN6Q8TEA1 469 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 U2AF1L4Q8WU68 220 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 FERMT2Q96AC1 680 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 PHF20Q9BVI0 1012 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 TMEM106CQ9BVX2 250 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 WDR11Q9BZH6 1224 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 KATNBL1Q9H079 304 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 ZMYND12Q9H0C1 365 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 C6orf50Q9HD87 102 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 DDX20Q9UHI6 824 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 PNMA2Q9UL42 364 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 FAM184BQ9ULE4 1060 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 PCDHA4Q9UN74 947 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 SMC3Q9UQE7 1217 aa5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 DIS3Q9Y2L1 958 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-202ENST00000524955 SYNGAP1Q96PV0 1343 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 STK36Q9NRP7 1315 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 HTTP42858 3142 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 DDX39AO00148 427 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 PIK3CDO00329 1044 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 SEPT4O43236 478 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 EDIL3O43854 480 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 SGPL1O95470 568 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 TDP2O95551 362 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 MMP1P03956 469 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 ARP10275 920 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 TXNP10599 105 aaKnown RBP5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 ITGB5P18084 799 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 EDNRBP24530 442 aa5.26□□□□□ -1.57
CHMP4A-202ENST00000524955 ZNF76P36508 570 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms