RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 ARHGAP4P98171 946 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 PAK1Q13153 545 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 GRB10Q13322 594 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 KCNB1Q14721 858 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
BEST1-204ENST00000524926 KLRC4O43908 158 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 PRCPP42785 496 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 TRAF1Q13077 416 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 SV2BQ7L1I2 683 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 NUDT12Q9BQG2 462 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 TRIM9Q9C026 710 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 DEFB129Q9H1M3 183 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 OPLAHO14841 1288 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 ASIC1P78348 528 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 NELFBQ8WX92 580 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 CCDC47Q96A33 483 aaKnown RBP17.16■□□□□ 0.34
BEST1-204ENST00000524926 PNMA5Q96PV4 448 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 RWDD2AQ9UIY3 292 aa17.16■□□□□ 0.34
BEST1-204ENST00000524926 CYP3A7-CYP3A51PA0A087WV96 503 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 CFBP00751 764 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 SFPQP23246 707 aaKnown RBP eCLIP17.15■□□□□ 0.34
BEST1-204ENST00000524926 CYP3A7P24462 503 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 PRR16Q569H4 304 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 FAM160B2Q86V87 743 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 C7orf25Q9BPX7 421 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 FBXO28Q9NVF7 368 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 INTS13Q9NVM9 706 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 FEM1BQ9UK73 627 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 SMCHD1A6NHR9 2005 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 ZNF541Q9H0D2 1346 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 RHOBTB3O94955 611 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 MCM6Q14566 821 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 ARMCX5Q6P1M9 558 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 UPF1Q92900 1129 aaKnown RBP eCLIP17.15■□□□□ 0.34
BEST1-204ENST00000524926 RANBP17Q9H2T7 1088 aaKnown RBP17.15■□□□□ 0.34
BEST1-204ENST00000524926 BLOC1S4Q9NUP1 217 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 STK17AQ9UEE5 414 aa17.15■□□□□ 0.34
BEST1-204ENST00000524926 H7C1D1 291 aa17.14■□□□□ 0.33
BEST1-204ENST00000524926 CCZ1BP86790 482 aa17.14■□□□□ 0.33
BEST1-204ENST00000524926 CCZ1P86791 482 aaPredicted RBP17.14■□□□□ 0.33
BEST1-204ENST00000524926 PDE4DQ08499 809 aa17.14■□□□□ 0.33
BEST1-204ENST00000524926 MOXD1Q6UVY6 613 aa17.14■□□□□ 0.33
BEST1-204ENST00000524926 LARP4BQ92615 738 aaKnown RBP17.14■□□□□ 0.33
BEST1-204ENST00000524926 R3HCC1Q9Y3T6 440 aaKnown RBP17.14■□□□□ 0.33
BEST1-204ENST00000524926 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
BEST1-204ENST00000524926 STIM1Q13586 685 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 NBPF12Q5TAG4 269 aaPredicted RBP17.13■□□□□ 0.33
BEST1-204ENST00000524926 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 ADSSL1Q8N142 457 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 CRYGNQ8WXF5 182 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 TBC1D5Q92609 795 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 EXOC1Q9NV70 894 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 PIK3CDO00329 1044 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 PLA2G6O60733 806 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 ZNF76P36508 570 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 SREBF1P36956 1147 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 CDKAL1Q5VV42 579 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 ARHGAP27Q6ZUM4 889 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 SLFN12Q8IYM2 578 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 GIMAP8Q8ND71 665 aaPredicted RBP17.13■□□□□ 0.33
BEST1-204ENST00000524926 MBOAT7Q96N66 472 aa17.13■□□□□ 0.33
BEST1-204ENST00000524926 CTNND1O60716 968 aaKnown RBP17.12■□□□□ 0.33
BEST1-204ENST00000524926 CCT6AP40227 531 aaKnown RBP17.12■□□□□ 0.33
BEST1-204ENST00000524926 SEMA3FQ13275 785 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 RAD54LQ92698 747 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 FAM86B1E9PN63 330 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 GCOM1H8Y6P7 765 aaPredicted RBP17.12■□□□□ 0.33
BEST1-204ENST00000524926 FAM86B2P0C5J1 330 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 POLR2MP0CAP2 368 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 INPP5BP32019 993 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 NR1I3Q14994 352 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 ECM1Q16610 540 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 DYMQ7RTS9 669 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 CTAGE1Q96RT6 745 aa17.12■□□□□ 0.33
BEST1-204ENST00000524926 MRPL11Q9Y3B7 192 aaKnown RBP17.12■□□□□ 0.33
BEST1-204ENST00000524926 A0A1B0GTH6 734 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 PSMA7O14818 248 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 NRDCO43847 1150 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 Q4G0T1 1027 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 ANGEL2Q5VTE6 544 aaKnown RBP17.11■□□□□ 0.33
BEST1-204ENST00000524926 KCNK18Q7Z418 384 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 ATAD5Q96QE3 1844 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 MYMKA6NI61 221 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 FILIP1LQ4L180 1135 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 PRAMEF18Q5VWM3 479 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 SPECC1LQ69YQ0 1117 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
BEST1-204ENST00000524926 STAT3P40763 770 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 STK4Q13043 487 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 DGKZQ13574 1117 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 APTXQ7Z2E3 356 aaKnown RBP17.1■□□□□ 0.33
BEST1-204ENST00000524926 ETNPPLQ8TBG4 499 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
BEST1-204ENST00000524926 TEX33O43247 280 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms