RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 FAM47CQ5HY64 1035 aa19.03■□□□□ 0.64
HIF3A-208ENST00000524533 RPUSD2Q8IZ73 545 aaKnown RBP19.03■□□□□ 0.64
HIF3A-208ENST00000524533 RGS22Q8NE09 1264 aa19.03■□□□□ 0.64
HIF3A-208ENST00000524533 EXOC6Q8TAG9 804 aa19.03■□□□□ 0.64
HIF3A-208ENST00000524533 SCLYQ96I15 445 aa19.03■□□□□ 0.64
HIF3A-208ENST00000524533 ZSCAN10Q96SZ4 725 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-208ENST00000524533 GAS2L1Q99501 681 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-208ENST00000524533 DHX16O60231 1041 aaKnown RBP19.02■□□□□ 0.64
HIF3A-208ENST00000524533 TXNP10599 105 aaKnown RBP19.02■□□□□ 0.64
HIF3A-208ENST00000524533 CYP2C9P11712 490 aa19.02■□□□□ 0.64
HIF3A-208ENST00000524533 ADGRF4Q8IZF3 695 aa19.02■□□□□ 0.64
HIF3A-208ENST00000524533 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.64
HIF3A-208ENST00000524533 COPS5Q92905 334 aa19.02■□□□□ 0.64
HIF3A-208ENST00000524533 PRDM12Q9H4Q4 367 aa19.02■□□□□ 0.64
HIF3A-208ENST00000524533 KPNA6O60684 536 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 TTLL4Q14679 1199 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 NBPF20Q3BBV1 942 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 USP38Q8NB14 1042 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 ANKS1AQ92625 1134 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 KRT23Q9C075 422 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 MAF1Q9H063 256 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 CTNNA3Q9UI47 895 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 KIAA1217Q5T5P2 1943 aa19.01■□□□□ 0.63
HIF3A-208ENST00000524533 SCN5AQ14524 2016 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 A6NJR5 290 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 ZBBXA8MT70 800 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 ARIH2O95376 493 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 PFKMP08237 780 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 PARP1P09874 1014 aaKnown RBP19■□□□□ 0.63
HIF3A-208ENST00000524533 QRICH1Q2TAL8 776 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 UBAC1Q9BSL1 405 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 NKX2-4Q9H2Z4 354 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 CNNM2Q9H8M5 875 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 SLC28A3Q9HAS3 691 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 ZSWIM5Q9P217 1185 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 SLC4A7Q9Y6M7 1214 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 VCANP13611 3396 aa19■□□□□ 0.63
HIF3A-208ENST00000524533 NFRKBQ6P4R8 1299 aa18.99■□□□□ 0.63
HIF3A-208ENST00000524533 FBXO11Q86XK2 927 aa18.99■□□□□ 0.63
HIF3A-208ENST00000524533 MCF2L2Q86YR7 1114 aa18.99■□□□□ 0.63
HIF3A-208ENST00000524533 SYTL5Q8TDW5 730 aaPredicted RBP18.99■□□□□ 0.63
HIF3A-208ENST00000524533 NSUN6Q8TEA1 469 aaKnown RBP18.99■□□□□ 0.63
HIF3A-208ENST00000524533 PPP1R13LQ8WUF5 828 aa18.99■□□□□ 0.63
HIF3A-208ENST00000524533 TBC1D5Q92609 795 aa18.99■□□□□ 0.63
HIF3A-208ENST00000524533 YBX2Q9Y2T7 364 aaKnown RBP18.99■□□□□ 0.63
HIF3A-208ENST00000524533 SPTBN5Q9NRC6 3674 aaKnown RBP18.99■□□□□ 0.63
HIF3A-208ENST00000524533 PTPN11Q06124 597 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-208ENST00000524533 DEFB128Q7Z7B8 93 aa18.98■□□□□ 0.63
HIF3A-208ENST00000524533 VWCEQ96DN2 955 aa18.98■□□□□ 0.63
HIF3A-208ENST00000524533 TAAR1Q96RJ0 339 aa18.98■□□□□ 0.63
HIF3A-208ENST00000524533 JMJD4Q9H9V9 463 aa18.98■□□□□ 0.63
HIF3A-208ENST00000524533 COL20A1Q9P218 1284 aa18.98■□□□□ 0.63
HIF3A-208ENST00000524533 MRPL11Q9Y3B7 192 aaKnown RBP18.98■□□□□ 0.63
HIF3A-208ENST00000524533 GH1P01241 217 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 CHMP4BP1P59074 171 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 IFIT1BQ5T764 474 aaKnown RBP18.97■□□□□ 0.63
HIF3A-208ENST00000524533 CCDC62Q6P9F0 684 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 SEPT14Q6ZU15 432 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 PPM1EQ8WY54 764 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 RMDN3Q96TC7 470 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 IL25Q9H293 177 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 VAT1LQ9HCJ6 419 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 NOD1Q9Y239 953 aa18.97■□□□□ 0.63
HIF3A-208ENST00000524533 PITPNM1O00562 1244 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 MMP3P08254 477 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 ATP2A2P16615 1042 aaKnown RBP18.96■□□□□ 0.63
HIF3A-208ENST00000524533 RFC2P35250 354 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 RABGGTBP53611 331 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 ARHGAP1Q07960 439 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 STXBP2Q15833 593 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 LY6KQ17RY6 165 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 ARHGEF16Q5VV41 709 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 PPP2R2DQ66LE6 453 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 RETREG2Q8NC44 543 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 AFG1LQ8WV93 481 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 SYMPKQ92797 1274 aaKnown RBP18.96■□□□□ 0.63
HIF3A-208ENST00000524533 IWS1Q96ST2 819 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 PCDHA11Q9Y5I1 949 aa18.96■□□□□ 0.63
HIF3A-208ENST00000524533 CHD7Q9P2D1 2997 aa18.95■□□□□ 0.62
HIF3A-208ENST00000524533 ACTN1P12814 892 aa18.95■□□□□ 0.62
HIF3A-208ENST00000524533 EIF2AK2P19525 551 aaKnown RBP18.95■□□□□ 0.62
HIF3A-208ENST00000524533 BFSP2Q13515 415 aa18.95■□□□□ 0.62
HIF3A-208ENST00000524533 TJAP1Q5JTD0 557 aa18.95■□□□□ 0.62
HIF3A-208ENST00000524533 CHST3Q7LGC8 479 aa18.95■□□□□ 0.62
HIF3A-208ENST00000524533 STAG2Q8N3U4 1231 aa18.95■□□□□ 0.62
HIF3A-208ENST00000524533 AMNQ9BXJ7 453 aa18.95■□□□□ 0.62
HIF3A-208ENST00000524533 CFBP00751 764 aa18.94■□□□□ 0.62
HIF3A-208ENST00000524533 GSPT1P15170 499 aaKnown RBP18.94■□□□□ 0.62
HIF3A-208ENST00000524533 IGFBP4P22692 258 aa18.94■□□□□ 0.62
HIF3A-208ENST00000524533 ADGRE1Q14246 886 aa18.94■□□□□ 0.62
HIF3A-208ENST00000524533 SEC23AQ15436 765 aa18.94■□□□□ 0.62
HIF3A-208ENST00000524533 CCDC155Q8N6L0 562 aa18.94■□□□□ 0.62
HIF3A-208ENST00000524533 PRDM6Q9NQX0 595 aa18.94■□□□□ 0.62
HIF3A-208ENST00000524533 PXMP2Q9NR77 195 aa18.94■□□□□ 0.62
HIF3A-208ENST00000524533 KLRF2D3W0D1 207 aa18.93■□□□□ 0.62
HIF3A-208ENST00000524533 IQCF3P0C7M6 154 aa18.93■□□□□ 0.62
HIF3A-208ENST00000524533 MYOGP15173 224 aa18.93■□□□□ 0.62
HIF3A-208ENST00000524533 PDE4AP27815 886 aa18.93■□□□□ 0.62
HIF3A-208ENST00000524533 TRDNQ13061 729 aa18.93■□□□□ 0.62
HIF3A-208ENST00000524533 PTGISQ16647 500 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms