RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 TTLL4Q14679 1199 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 CCDC62Q6P9F0 684 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 CYB5R4Q7L1T6 521 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 STAG2Q8N3U4 1231 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 RUFY2Q8WXA3 655 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 MYLIPQ8WY64 445 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 HERVK_113Q902F9 699 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 IWS1Q96ST2 819 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 VAT1LQ9HCJ6 419 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 GPHNQ9NQX3 736 aaPredicted RBP19.6■□□□□ 0.73
SPIDR-221ENST00000523814 COL20A1Q9P218 1284 aa19.6■□□□□ 0.73
SPIDR-221ENST00000523814 UMODL1Q5DID0 1318 aa19.59■□□□□ 0.73
SPIDR-221ENST00000523814 FGBP02675 491 aa19.59■□□□□ 0.73
SPIDR-221ENST00000523814 COPS5Q92905 334 aa19.59■□□□□ 0.73
SPIDR-221ENST00000523814 MTMR8Q96EF0 704 aa19.59■□□□□ 0.73
SPIDR-221ENST00000523814 U3KPZ7 1027 aaPredicted RBP19.59■□□□□ 0.73
SPIDR-221ENST00000523814 PALM3A6NDB9 673 aaPredicted RBP19.58■□□□□ 0.72
SPIDR-221ENST00000523814 KLRF2D3W0D1 207 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 DHX16O60231 1041 aaKnown RBP19.58■□□□□ 0.72
SPIDR-221ENST00000523814 CCL23P55773 120 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 PTH1RQ03431 593 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 TRDNQ13061 729 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 NBPF20Q3BBV1 942 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 RPUSD2Q8IZ73 545 aaKnown RBP19.58■□□□□ 0.72
SPIDR-221ENST00000523814 MAFAQ8NHW3 353 aaPredicted RBP19.58■□□□□ 0.72
SPIDR-221ENST00000523814 TIFAQ96CG3 184 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 RMDN3Q96TC7 470 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 AMNQ9BXJ7 453 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 WNT8AQ9H1J5 351 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 TRMT13Q9NUP7 481 aaKnown RBP19.58■□□□□ 0.72
SPIDR-221ENST00000523814 MAD2L2Q9UI95 211 aa19.58■□□□□ 0.72
SPIDR-221ENST00000523814 GRXCR1A8MXD5 290 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 ARIH2O95376 493 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 CYP21A2P08686 494 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 GHRHRQ02643 423 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 GRIN2CQ14957 1233 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 STXBP2Q15833 593 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 NFRKBQ6P4R8 1299 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.57■□□□□ 0.72
SPIDR-221ENST00000523814 VWCEQ96DN2 955 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 ZNF576Q9H609 170 aa19.57■□□□□ 0.72
SPIDR-221ENST00000523814 CXXC1Q9P0U4 656 aaPredicted RBP19.57■□□□□ 0.72
SPIDR-221ENST00000523814 OPLAHO14841 1288 aa19.56■□□□□ 0.72
SPIDR-221ENST00000523814 PBX2P40425 430 aa19.56■□□□□ 0.72
SPIDR-221ENST00000523814 PTPN11Q06124 597 aaPredicted RBP19.56■□□□□ 0.72
SPIDR-221ENST00000523814 PBX4Q9BYU1 374 aa19.56■□□□□ 0.72
SPIDR-221ENST00000523814 MTIF3Q9H2K0 278 aaKnown RBP19.56■□□□□ 0.72
SPIDR-221ENST00000523814 MAP3K20Q9NYL2 800 aaKnown RBP19.56■□□□□ 0.72
SPIDR-221ENST00000523814 ZBTB5O15062 677 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 SGSM2O43147 1006 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 PPP1R11O60927 126 aaPredicted RBP19.55■□□□□ 0.72
SPIDR-221ENST00000523814 EIF3JO75822 258 aaKnown RBP19.55■□□□□ 0.72
SPIDR-221ENST00000523814 CYP2C9P11712 490 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 FOSL2P15408 326 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 HSD17B4P51659 736 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 ARHGEF16Q5VV41 709 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 SEPT14Q6ZU15 432 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 SAMD3Q8N6K7 520 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 UNC80Q8N2C7 3258 aa19.55■□□□□ 0.72
SPIDR-221ENST00000523814 IFIT3O14879 490 aaKnown RBP19.54■□□□□ 0.72
SPIDR-221ENST00000523814 CFBP00751 764 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 GH1P01241 217 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 NR3C2P08235 984 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 IRX6P78412 446 aaPredicted RBP19.54■□□□□ 0.72
SPIDR-221ENST00000523814 ARHGAP1Q07960 439 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 LY6KQ17RY6 165 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 FAM47CQ5HY64 1035 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 STOX1Q6ZVD7 989 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 OTOP2Q7RTS6 562 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 AFG1LQ8WV93 481 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 RIOX1Q9H6W3 641 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 PXMP2Q9NR77 195 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 PCDHA1Q9Y5I3 950 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 TAF6LQ9Y6J9 622 aa19.54■□□□□ 0.72
SPIDR-221ENST00000523814 CDH23Q9H251 3354 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 E7EWF7 191 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 PFKMP08237 780 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 TROAPQ12815 778 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 TRAF1Q13077 416 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 GRM4Q14833 912 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 RAB30Q15771 203 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 SLC35G1Q2M3R5 365 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 NCOA7Q8NI08 942 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 MAP4K1Q92918 833 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 SCLYQ96I15 445 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 SENP2Q9HC62 589 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 MSRAQ9UJ68 235 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 DDX41Q9UJV9 622 aaKnown RBP19.53■□□□□ 0.72
SPIDR-221ENST00000523814 SCN10AQ9Y5Y9 1956 aa19.53■□□□□ 0.72
SPIDR-221ENST00000523814 ERICH2A1L162 156 aa19.52■□□□□ 0.72
SPIDR-221ENST00000523814 EIF2AK2P19525 551 aaKnown RBP19.52■□□□□ 0.72
SPIDR-221ENST00000523814 EMID1Q96A84 441 aaPredicted RBP19.52■□□□□ 0.72
SPIDR-221ENST00000523814 EYSQ5T1H1 3165 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 PITPNM1O00562 1244 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 MMP3P08254 477 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 CASTP20810 708 aaKnown RBP19.51■□□□□ 0.71
SPIDR-221ENST00000523814 WTAPQ15007 396 aa19.51■□□□□ 0.71
SPIDR-221ENST00000523814 SART3Q15020 963 aaKnown RBP19.51■□□□□ 0.71
SPIDR-221ENST00000523814 RALYLQ86SE5 291 aaKnown RBP19.51■□□□□ 0.71
SPIDR-221ENST00000523814 VSIG10LQ86VR7 867 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms