RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 IKBKBO14920 756 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 MYL5Q02045 173 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 HS1BP3Q53T59 392 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 MOXD1Q6UVY6 613 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.43■■□□□ 1.345e-10■■□□□ 12.4
SQLE-206ENST00000523430 GSDMAQ96QA5 445 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 HSD3B7Q9H2F3 369 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 FAM86B1E9PN63 330 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 GCOM1H8Y6P7 765 aaPredicted RBP23.43■■□□□ 1.34
SQLE-206ENST00000523430 FAM86B2P0C5J1 330 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 POLR2MP0CAP2 368 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 FMR1Q06787 632 aaKnown RBP eCLIP23.43■■□□□ 1.343e-7■□□□□ 8.2
SQLE-206ENST00000523430 NOL9Q5SY16 702 aaKnown RBP23.43■■□□□ 1.34
SQLE-206ENST00000523430 MLKLQ8NB16 471 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 SPC24Q8NBT2 197 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 LENG9Q96B70 501 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 DCPSQ96C86 337 aaKnown RBP23.43■■□□□ 1.34
SQLE-206ENST00000523430 PPP1R9AQ9ULJ8 1098 aa23.43■■□□□ 1.34
SQLE-206ENST00000523430 WDR90Q96KV7 1748 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 SMTNL1A8MU46 457 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 HMGCS2P54868 508 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 GRB10Q13322 594 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 PRR16Q569H4 304 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 SMYD4Q8IYR2 804 aaPredicted RBP23.42■■□□□ 1.34
SQLE-206ENST00000523430 RAB34Q9BZG1 259 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 SLC38A10Q9HBR0 1119 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 KBTBD4Q9NVX7 518 aa23.42■■□□□ 1.34
SQLE-206ENST00000523430 MARCH6O60337 910 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 USP2O75604 605 aaPredicted RBP23.41■■□□□ 1.34
SQLE-206ENST00000523430 SULF1Q8IWU6 871 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 PNMA5Q96PV4 448 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 NUDT12Q9BQG2 462 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 PDIA5Q14554 519 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 Q4G0T1 1027 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 TRMT44Q8IYL2 757 aaKnown RBP23.41■■□□□ 1.34
SQLE-206ENST00000523430 CPXCR1Q8N123 301 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 ETNPPLQ8TBG4 499 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 SNX29Q8TEQ0 813 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 CALML4Q96GE6 196 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 CUEDC2Q9H467 287 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 RAVER2Q9HCJ3 691 aaKnown RBP23.41■■□□□ 1.34
SQLE-206ENST00000523430 DACH1Q9UI36 760 aa23.41■■□□□ 1.34
SQLE-206ENST00000523430 RBBP6Q7Z6E9 1792 aaKnown RBP23.4■■□□□ 1.34
SQLE-206ENST00000523430 RPN1P04843 607 aaKnown RBP23.4■■□□□ 1.34
SQLE-206ENST00000523430 CD44P16070 742 aaKnown RBP23.4■■□□□ 1.34
SQLE-206ENST00000523430 TEX2Q8IWB9 1127 aa23.4■■□□□ 1.34
SQLE-206ENST00000523430 WNK4Q96J92 1243 aa23.4■■□□□ 1.34
SQLE-206ENST00000523430 L3MBTL3Q96JM7 780 aaPredicted RBP23.4■■□□□ 1.34
SQLE-206ENST00000523430 PCDHA12Q9UN75 941 aa23.4■■□□□ 1.34
SQLE-206ENST00000523430 ESPNB1AK53 854 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 NFIBO00712 420 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 CIITAP33076 1130 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 TPM4P67936 248 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 VGLL4Q14135 290 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 CYP2W1Q8TAV3 490 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 CLEC4DQ8WXI8 215 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 C12orf42Q96LP6 360 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 MED15Q96RN5 788 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 MAGEF1Q9HAY2 307 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 SNCAIPQ9Y6H5 919 aa23.39■■□□□ 1.34
SQLE-206ENST00000523430 CYP3A4P08684 503 aa23.39■■□□□ 1.33
SQLE-206ENST00000523430 UBXN2AP68543 259 aa23.39■■□□□ 1.33
SQLE-206ENST00000523430 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.39■■□□□ 1.33
SQLE-206ENST00000523430 KRT26Q7Z3Y9 468 aa23.39■■□□□ 1.33
SQLE-206ENST00000523430 ATG4CQ96DT6 458 aa23.39■■□□□ 1.33
SQLE-206ENST00000523430 RRAGDQ9NQL2 400 aaPredicted RBP23.39■■□□□ 1.33
SQLE-206ENST00000523430 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.39■■□□□ 1.33
SQLE-206ENST00000523430 RLFQ13129 1914 aa23.38■■□□□ 1.33
SQLE-206ENST00000523430 ATP1A3P13637 1013 aa23.38■■□□□ 1.33
SQLE-206ENST00000523430 KRT79Q5XKE5 535 aa23.38■■□□□ 1.33
SQLE-206ENST00000523430 DPY19L2Q6NUT2 758 aa23.38■■□□□ 1.33
SQLE-206ENST00000523430 HOMER2Q9NSB8 354 aa23.38■■□□□ 1.33
SQLE-206ENST00000523430 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.38■■□□□ 1.33
SQLE-206ENST00000523430 ALAS1P13196 640 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 STAT3P40763 770 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 HSD17B4P51659 736 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 GPR162Q16538 588 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 ECM1Q16610 540 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 TMEM119Q4V9L6 283 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.37■■□□□ 1.33
SQLE-206ENST00000523430 SLFN12Q8IYM2 578 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 CDK5RAP3Q96JB5 506 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 BLOC1S4Q9NUP1 217 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 AFG3L2Q9Y4W6 797 aa23.37■■□□□ 1.33
SQLE-206ENST00000523430 IGLV3-22A0A075B6J6 115 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 EPHX2P34913 555 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 ZSCAN30Q86W11 494 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 MRFAP1L1Q96HT8 127 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 FANCLQ9NW38 375 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 RMND1Q9NWS8 449 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 COL20A1Q9P218 1284 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 PPP1R3GB7ZBB8 358 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 VWA5AO00534 786 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 MSH4O15457 936 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 KLRC4O43908 158 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 CDC25BP30305 580 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 ZNF76P36508 570 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 SPIRE1Q08AE8 756 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 MUM1L1Q5H9M0 696 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 KLHL10Q6JEL2 608 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms