RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 VPS72Q15906 364 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 DALRD3Q5D0E6 543 aaKnown RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 RNF43Q68DV7 783 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 CRACR2BQ8N4Y2 399 aaPredicted RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 SLKQ9H2G2 1235 aaPredicted RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 NCOA5Q9HCD5 579 aaKnown RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 CWC22Q9HCG8 908 aaKnown RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 TPSG1Q9NRR2 321 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 MINPP1Q9UNW1 487 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 DIS3Q9Y2L1 958 aaKnown RBP8.64□□□□□ -1.03
PCM1-216ENST00000522777 GLI3P10071 1580 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 SLIT2O94813 1529 aa8.64□□□□□ -1.03
PCM1-216ENST00000522777 PABPC1P11940 636 aaKnown RBP8.63□□□□□ -1.03
PCM1-216ENST00000522777 FAM50AQ14320 339 aaKnown RBP8.63□□□□□ -1.03
PCM1-216ENST00000522777 CBX2Q14781 532 aaPredicted RBP8.63□□□□□ -1.03
PCM1-216ENST00000522777 NOL9Q5SY16 702 aaKnown RBP8.63□□□□□ -1.03
PCM1-216ENST00000522777 RNF187Q5TA31 235 aaPredicted RBP8.63□□□□□ -1.03
PCM1-216ENST00000522777 GTF2IRD2BQ6EKJ0 949 aa8.63□□□□□ -1.03
PCM1-216ENST00000522777 POMZP3Q6PJE2 187 aa8.63□□□□□ -1.03
PCM1-216ENST00000522777 GTF2IRD2Q86UP8 949 aa8.63□□□□□ -1.03
PCM1-216ENST00000522777 MFSD4AQ8N468 514 aa8.63□□□□□ -1.03
PCM1-216ENST00000522777 PIWIL2Q8TC59 973 aaKnown RBP8.63□□□□□ -1.03
PCM1-216ENST00000522777 HDAC8Q9BY41 377 aa8.63□□□□□ -1.03
PCM1-216ENST00000522777 KCNH3Q9ULD8 1083 aa8.63□□□□□ -1.03
PCM1-216ENST00000522777 H0Y8X5 98 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 PRODHO43272 600 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 KCNH1O95259 989 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 SRFP11831 508 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 CTSKP43235 329 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 CYP4F3Q08477 520 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 KCNMA1Q12791 1236 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 PPP2R5DQ14738 602 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 CYP27C1Q4G0S4 372 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 FILIP1Q7Z7B0 1213 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 SCUBE1Q8IWY4 988 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 FBXL6Q8N531 539 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 CDC6Q99741 560 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 IER2Q9BTL4 223 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 CHST7Q9NS84 486 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 IFT57Q9NWB7 429 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 PLAAQ9Y263 795 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 SPHKAPQ2M3C7 1700 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 PXDNQ92626 1479 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 E9PCH4 1651 aa8.62□□□□□ -1.03
PCM1-216ENST00000522777 NUP155O75694 1391 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.61□□□□□ -1.03
PCM1-216ENST00000522777 DLX3O60479 287 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 RFPL3O75679 317 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 GFRA1P56159 465 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 SUMO1P63165 101 aaKnown RBP8.61□□□□□ -1.03
PCM1-216ENST00000522777 RASSF7Q02833 373 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 NFIAQ12857 509 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 SF1Q15637 639 aaKnown RBP8.61□□□□□ -1.03
PCM1-216ENST00000522777 PTPROQ16827 1216 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 NSMFQ6X4W1 530 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 ZDHHC15Q96MV8 337 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 DSCC1Q9BVC3 393 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 GPR62Q9BZJ7 368 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 NKX2-4Q9H2Z4 354 aa8.61□□□□□ -1.03
PCM1-216ENST00000522777 PLD2O14939 933 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 DNAJC6O75061 913 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 C6orf222P0C671 652 aaPredicted RBP8.6□□□□□ -1.03
PCM1-216ENST00000522777 MASP1P48740 699 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 OXCT1P55809 520 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 CYP27A1Q02318 531 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 C21orf62-AS1Q17RA5 79 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 PLA2G4EQ3MJ16 856 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 NINJ1Q92982 152 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 C1orf159Q96HA4 380 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 DBNDD2Q9BQY9 259 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 MCMBPQ9BTE3 642 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 BRINP2Q9C0B6 783 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 DUSP15Q9H1R2 295 aaPredicted RBP8.6□□□□□ -1.03
PCM1-216ENST00000522777 SPC25Q9HBM1 224 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 SF3B6Q9Y3B4 125 aaKnown RBP8.6□□□□□ -1.03
PCM1-216ENST00000522777 ST14Q9Y5Y6 855 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 IQGAP3Q86VI3 1631 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 HFM1A2PYH4 1435 aa8.6□□□□□ -1.03
PCM1-216ENST00000522777 MARF1Q9Y4F3 1742 aaKnown RBP8.6□□□□□ -1.03
PCM1-216ENST00000522777 SPATA31A3Q5VYP0 1347 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 DNAJC25-GNG10A0A024R161 153 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 GNAT3A8MTJ3 354 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 SCG5P05408 212 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 MAP4K2Q12851 820 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
PCM1-216ENST00000522777 NKPD1Q17RQ9 610 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 TM4SF20Q53R12 229 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 CRTC3Q6UUV7 619 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 ENOX1Q8TC92 643 aaKnown RBP8.59□□□□□ -1.03
PCM1-216ENST00000522777 CLUHP3Q96NS8 147 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 MRPL4Q9BYD3 311 aaKnown RBP8.59□□□□□ -1.03
PCM1-216ENST00000522777 TMX1Q9H3N1 280 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 GPR55Q9Y2T6 319 aaPredicted RBP8.59□□□□□ -1.03
PCM1-216ENST00000522777 BRWD3Q6RI45 1802 aa8.59□□□□□ -1.03
PCM1-216ENST00000522777 MEIS1O00470 390 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
PCM1-216ENST00000522777 VAMP4O75379 141 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 GSNP06396 782 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 AMPD2Q01433 879 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 EZH2Q15910 746 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms