RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	RHOBTB3	O94955	611 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	NR1I3	Q14994	352 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	TPD52L1	Q16890	204 aa	Predicted RBP	18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	RAB34	Q9BZG1	259 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	BLOC1S4	Q9NUP1	217 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	SMCHD1	A6NHR9	2005 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	AP3B2	Q13367	1082 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	ADSSL1	Q8N142	457 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	SNX29	Q8TEQ0	813 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	C16orf45	Q96MC5	204 aa	Predicted RBP	18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	TEPSIN	Q96N21	525 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	C7orf25	Q9BPX7	421 aa		18.71	■□□□□ 0.59
FAM49B-223	ENST00000522746	MARCH6	O60337	910 aa		18.7	■□□□□ 0.58
FAM49B-223	ENST00000522746	HACL1	Q9UJ83	578 aa		18.7	■□□□□ 0.58
FAM49B-223	ENST00000522746	TRIM49B	A6NDI0	452 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	TEX33	O43247	280 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	RPS12	P25398	132 aa	Known RBP	18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	MMP14	P50281	582 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	USP11	P51784	963 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	ASIC1	P78348	528 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	TBX2	Q13207	712 aa	Predicted RBP	18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	MCM6	Q14566	821 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	PRAMEF18	Q5VWM3	479 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	CRYGN	Q8WXF5	182 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	CDK5RAP3	Q96JB5	506 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	HOXA13	P31271	388 aa	Predicted RBP	18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	PMS1	P54277	932 aa	Known RBP	18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	ARHGAP4	P98171	946 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	MAP3K10	Q02779	954 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	ECM1	Q16610	540 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	KRT79	Q5XKE5	535 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	SPECC1L	Q69YQ0	1117 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	KCNK18	Q7Z418	384 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	NAP1L4	Q99733	375 aa	Known RBP	18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	VCPKMT	Q9H867	229 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	STK17A	Q9UEE5	414 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	PCDHA12	Q9UN75	941 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	FZD1	Q9UP38	647 aa		18.69	■□□□□ 0.58
FAM49B-223	ENST00000522746	TERF1	P54274	439 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	PDE4D	Q08499	809 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	KIF4B	Q2VIQ3	1234 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	SV2B	Q7L1I2	683 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	TRPM4	Q8TD43	1214 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	LARP4B	Q92615	738 aa	Known RBP	18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	TRMT1	Q9NXH9	659 aa	Known RBP	18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	ADD3	Q9UEY8	706 aa	Known RBP	18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	CYP3A7-CYP3A51P	A0A087WV96	503 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	CYP3A7	P24462	503 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	AMPD3	Q01432	767 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	CCDC174	Q6PII3	467 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	KIFC2	Q96AC6	838 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	MBOAT7	Q96N66	472 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	KCNMB3	Q9NPA1	279 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	EXOC1	Q9NV70	894 aa		18.68	■□□□□ 0.58
FAM49B-223	ENST00000522746	ATAD5	Q96QE3	1844 aa		18.67	■□□□□ 0.58
FAM49B-223	ENST00000522746	SPDYE3	A6NKU9	549 aa		18.67	■□□□□ 0.58
FAM49B-223	ENST00000522746	TMEM119	Q4V9L6	283 aa		18.67	■□□□□ 0.58
FAM49B-223	ENST00000522746	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.67	■□□□□ 0.58
FAM49B-223	ENST00000522746	CCAR2	Q8N163	923 aa	Known RBP	18.67	■□□□□ 0.58
FAM49B-223	ENST00000522746	RAD54L	Q92698	747 aa		18.67	■□□□□ 0.58
FAM49B-223	ENST00000522746	MYMK	A6NI61	221 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	PHF20L1	A8MW92	1017 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	FCER1A	P12319	257 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	STK4	Q13043	487 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	DGKZ	Q13574	1117 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	KRT31	Q15323	416 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	E4F1	Q66K89	784 aa	Predicted RBP	18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	ASNS	P08243	561 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	SREBF1	P36956	1147 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	CCT6A	P40227	531 aa	Known RBP	18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	SEMA3F	Q13275	785 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	PRR16	Q569H4	304 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	MCTP2	Q6DN12	878 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	MOXD1	Q6UVY6	613 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	HPS3	Q969F9	1004 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	CCDC47	Q96A33	483 aa	Known RBP	18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	CTAGE1	Q96RT6	745 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	TMX1	Q9H3N1	280 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	FBXO28	Q9NVF7	368 aa		18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	LIMA1	Q9UHB6	759 aa	Known RBP	18.66	■□□□□ 0.58
FAM49B-223	ENST00000522746	UQCRHL	A0A096LP55	91 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	FOS	P01100	380 aa	Predicted RBP	18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	UQCRH	P07919	91 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	STIM1	Q13586	685 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	DYM	Q7RTS9	669 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	CHURC1	Q8WUH1	139 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	TBC1D5	Q92609	795 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	DEFB129	Q9H1M3	183 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	RANBP17	Q9H2T7	1088 aa	Known RBP	18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	SH2D4A	Q9H788	454 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	KCNJ18	B7U540	433 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	FAM86B1	E9PN63	330 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	PSMA7	O14818	248 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	FAM86B2	P0C5J1	330 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	TNNT1	P13805	278 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	PBX1	P40424	430 aa		18.65	■□□□□ 0.58
FAM49B-223	ENST00000522746	STAT3	P40763	770 aa		18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms